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DNA作为用于光镊长度和力测量的计量标准。

DNA as a metrology standard for length and force measurements with optical tweezers.

作者信息

Rickgauer John Peter, Fuller Derek N, Smith Douglas E

机构信息

Department of Physics, University of California, San Diego, La Jolla, CA, USA.

出版信息

Biophys J. 2006 Dec 1;91(11):4253-7. doi: 10.1529/biophysj.106.089524. Epub 2006 Sep 8.

Abstract

Optical tweezers have broad applications in studies of structures and processes in molecular and cellular biophysics. Use of optical tweezers for quantitative molecular-scale measurement requires careful calibration in physical units. Here we show that DNA molecules may be used as metrology standards for force and length measurements. Analysis of DNA molecules of two specific lengths allows simultaneous determination of all essential measurement parameters. We validate this biological-calibration method experimentally and with simulated data, and show that precisions in determining length scale factor ( approximately 0.2%), length offset ( approximately 0.03%), force scale factor ( approximately 2%), and compliance of the traps ( approximately 3%) are limited only by current measurement variation, much of which arises from polydispersity of the microspheres ( approximately 2%). We find this procedure to be simpler and more convenient than previous methods, and suggest that it provides an easily replicated standard that can insure uniformity of measurements made in different laboratories.

摘要

光镊在分子和细胞生物物理学中的结构与过程研究中有着广泛应用。将光镊用于定量分子尺度测量需要对物理单位进行仔细校准。在此我们表明,DNA分子可用作力和长度测量的计量标准。对两种特定长度的DNA分子进行分析可同时确定所有基本测量参数。我们通过实验和模拟数据验证了这种生物校准方法,并表明在确定长度比例因子(约0.2%)、长度偏移(约0.03%)、力比例因子(约2%)和光阱柔度(约3%)时的精度仅受当前测量变化的限制,其中大部分源于微球的多分散性(约2%)。我们发现该方法比先前方法更简单、更便捷,并表明它提供了一种易于复制的标准,可确保不同实验室测量的一致性。

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