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新属新种——蛭栖玫球菌(Puniceicoccus vermicola),一种新型海洋细菌,以及新科——玫球菌科(Puniceicoccaceae)、新目——玫球菌目(Puniceicoccales)、新科——奥皮图特菌科(Opitutaceae)、新目——奥皮图特菌目(Opitutales)和疣微菌门(‘Verrucomicrobia’)中的新纲——奥皮图特菌纲(Opitutae)的描述。

Puniceicoccus vermicola gen. nov., sp. nov., a novel marine bacterium, and description of Puniceicoccaceae fam. nov., Puniceicoccales ord. nov., Opitutaceae fam. nov., Opitutales ord. nov. and Opitutae classis nov. in the phylum 'Verrucomicrobia'.

作者信息

Choo Yoe-Jin, Lee Kiyoung, Song Jaeho, Cho Jang-Cheon

机构信息

Division of Biology and Ocean Sciences, Inha University, Yonghyun-Dong, Incheon 402-751, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2007 Mar;57(Pt 3):532-537. doi: 10.1099/ijs.0.64616-0.

Abstract

A Gram-negative, chemoheterotrophic, facultatively anaerobic coccus, designated IMCC1545(T), was isolated from the digestive tract of a marine clamworm, Periserrula leucophryna, inhabiting a tidal flat of the Yellow Sea. Cells of strain IMCC1545(T) are non-motile, dividing by binary fission. The predominant fatty acids are anteiso-C(15 : 0) and C(18 : 0). The respiratory quinone is menaquinone-7 and the DNA G+C content is 52.1 mol%. Phylogenetic analyses based on 16S rRNA gene sequences using three treeing algorithms revealed that the strain formed a novel genus-level lineage within the phylum 'Verrucomicrobia'. The most closely related named organisms to strain IMCC1545(T) are 'Fucophilus fucoidanolyticus' SI-1234 (86.5 % 16S rRNA gene sequence similarity), Alterococcus agarolyticus ADT3(T) (81.8 %) and Opitutus terrae PB90-1(T) (80.3 %), which belong to subdivision 4 of the 'Verrucomicrobia'. Subdivision 4 of the 'Verrucomicrobia' (here named Opitutae classis nov.) was divided into two clades, a clade containing strain IMCC1545(T) and a clade containing Opitutus terrae. From the taxonomic data obtained in this study, it is proposed that the new marine isolate be placed into a novel genus and species named Puniceicoccus vermicola gen. nov., sp. nov. (the type strain of Puniceicoccus vermicola is IMCC1545(T)=KCCM 42343(T)=NBRC 101964(T)) within Puniceicoccaceae fam. nov and Puniceicoccales ord. nov in the class Opitutae. The family Opitutaceae fam. nov. and order Opitutales ord. nov. are also formally proposed.

摘要

从栖息于黄海潮间带的海洋沙蚕(Periserrula leucophryna)消化道中分离出一株革兰氏阴性、化能异养、兼性厌氧球菌,命名为IMCC1545(T)。IMCC1545(T)菌株的细胞不运动,通过二分分裂进行繁殖。主要脂肪酸为anteiso-C(15 : 0)和C(18 : 0)。呼吸醌为甲基萘醌-7,DNA的G+C含量为52.1 mol%。使用三种建树算法基于16S rRNA基因序列进行的系统发育分析表明,该菌株在“疣微菌门”内形成了一个新的属级谱系。与IMCC1545(T)菌株亲缘关系最近的已命名生物是“解岩藻聚糖岩藻球菌”SI-1234(16S rRNA基因序列相似性为86.5%)、溶琼脂交替球菌ADT3(T)(81.8%)和陆地奥皮杜斯菌PB90-1(T)(80.3%),它们属于“疣微菌门”的第4亚群。“疣微菌门”的第4亚群(在此命名为新奥皮杜斯纲)分为两个进化枝,一个进化枝包含IMCC1545(T)菌株,另一个进化枝包含陆地奥皮杜斯菌。根据本研究获得的分类学数据,建议将该新的海洋分离株归入一个新的属和种,命名为红斑球菌(Puniceicoccus vermicola),新属,新种(红斑球菌的模式菌株为IMCC1545(T)=KCCM 42343(T)=NBRC 101964(T)),置于新奥皮杜斯纲中的新红斑球菌科和新红斑球菌目中。还正式提出了新奥皮杜斯科和新奥皮杜斯目。

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