Shinar Guy, Milo Ron, Martínez María Rodríguez, Alon Uri
Departments of Molecular Cell Biology and Physics of Complex Systems, Weizmann Institute of Science, Rehovot 76100, Israel.
Proc Natl Acad Sci U S A. 2007 Dec 11;104(50):19931-5. doi: 10.1073/pnas.0706792104. Epub 2007 Dec 6.
Biological signaling systems produce an output, such as the level of a phosphorylated protein, in response to defined input signals. The output level as a function of the input level is called the system's input-output relation. One may ask whether this input-output relation is sensitive to changes in the concentrations of the system's components, such as proteins and ATP. Because component concentrations often vary from cell to cell, it might be expected that the input-output relation will likewise vary. If this is the case, different cells exposed to the same input signal will display different outputs. Such variability can be deleterious in systems where survival depends on accurate match of output to input. Here we suggest a mechanism that can provide input-output robustness, that is, an input-output relation that does not depend on variations in the concentrations of any of the system's components. The mechanism is based on certain bacterial signaling systems. It explains how specific molecular details can work together to provide robustness. Moreover, it suggests an approach that can help identify a wide family of nonequilibrium mechanisms that potentially have robust input-output relations.
生物信号系统会根据特定的输入信号产生一个输出,比如磷酸化蛋白的水平。作为输入水平函数的输出水平被称为系统的输入-输出关系。人们可能会问,这种输入-输出关系是否对系统组件(如蛋白质和ATP)浓度的变化敏感。由于组件浓度在不同细胞间常常有所不同,因此可以预期输入-输出关系也会随之变化。如果是这样,暴露于相同输入信号的不同细胞将显示出不同的输出。在生存依赖于输出与输入精确匹配的系统中,这种变异性可能是有害的。在此,我们提出一种能够提供输入-输出稳健性的机制,也就是说,一种不依赖于系统任何组件浓度变化的输入-输出关系。该机制基于某些细菌信号系统。它解释了特定分子细节如何共同作用以提供稳健性。此外,它还提出了一种有助于识别可能具有稳健输入-输出关系的广泛非平衡机制家族的方法。