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新种安弥链嗜酸菌、皱链嗜酸菌和产黑素链嗜酸菌,从松树土壤中分离出的嗜酸放线菌。

Streptacidiphilus anmyonensis sp. nov., Streptacidiphilus rugosus sp. nov. and Streptacidiphilus melanogenes sp. nov., acidophilic actinobacteria isolated from Pinus soils.

作者信息

Cho Sung-Heun, Han Ji-Hye, Ko Hye-Young, Kim Seung Bum

机构信息

Department of Microbiology, School of Bioscience and Biotechnology, Chungnam National University, 220 Gung-dong, Yuseong, Daejeon 305-764, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2008 Jul;58(Pt 7):1566-70. doi: 10.1099/ijs.0.65480-0.

Abstract

The taxonomic positions of 22 spore-forming, extensively branched actinobacteria isolated from Pinus soils were examined using a polyphasic approach. Analysis of the 16S rRNA gene sequences indicated that all of the isolates fell into three distinctive phylogenetic clusters within the genus Streptacidiphilus of the family Streptomycetaceae, and also that Streptacidiphilus jiangxiensis was the species closest to the three phyloclusters, with 16S rRNA gene sequence similarities ranging from 98.0 to 99.2 %. However, the low DNA-DNA relatedness values between representatives of the three clusters and S. jiangxiensis clearly differentiated them from one another. Representative isolates were also found to have chemotaxonomic features typical of the genus Streptacidiphilus and were distinguishable from all established species of Streptacidiphilus on the basis of a combination of phenotypic properties. It is evident from this study that each of the three phyloclusters should be equated with three novel Streptacidiphilus species, for which the following names are proposed: Streptacidiphilus anmyonensis sp. nov. (type strain AM11(T) =NBRC 103185(T) =KCTC 19278(T)), Streptacidiphilus rugosus sp. nov. (type strain AM16(T) =NBRC 103186(T) =KCTC 19279(T)) and Streptacidiphilus melanogenes sp. nov. (type strain SB-B34(T) =NBRC 103184(T) =KCTC 19280(T)).

摘要

采用多相分类方法研究了从松树土壤中分离出的22株产孢、广泛分支的放线菌的分类地位。16S rRNA基因序列分析表明,所有分离株均属于链霉菌科嗜酸性链霉菌属内的三个不同系统发育簇,江西嗜酸性链霉菌是与这三个系统发育簇最接近的物种,其16S rRNA基因序列相似性在98.0%至99.2%之间。然而,这三个簇的代表菌株与江西嗜酸性链霉菌之间较低的DNA-DNA相关性值清楚地将它们彼此区分开来。还发现代表菌株具有嗜酸性链霉菌属典型的化学分类特征,并且根据表型特征的组合可与嗜酸性链霉菌的所有已确定物种区分开来。从这项研究中可以明显看出,这三个系统发育簇中的每一个都应等同于三个新的嗜酸性链霉菌物种,为此提出以下名称:新种暗褐嗜酸性链霉菌(Streptacidiphilus anmyonensis sp. nov.)(模式菌株AM11(T)=NBRC 103185(T)=KCTC 19278(T))、新种皱皮嗜酸性链霉菌(Streptacidiphilus rugosus sp. nov.)(模式菌株AM16(T)=NBRC 103186(T)=KCTC 19279(T))和新种产黑色素嗜酸性链霉菌(Streptacidiphilus melanogenes sp. nov.)(模式菌株SB-B34(T)=NBRC 103184(T)=KCTC 19280(T))。

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