Utschig Lisa M, Chemerisov Sergey D, Tiede David M, Poluektov Oleg G
Chemical Sciences and Engineering Division, Argonne National Laboratory, 9700 South Cass Avenue, Argonne, Illinois 60439, USA.
Biochemistry. 2008 Sep 2;47(35):9251-7. doi: 10.1021/bi800574e. Epub 2008 Aug 9.
Electron paramagnetic resonance (EPR) was used to simultaneously study radiation-induced cofactor reduction and damaging radical formation in single crystals of the bacterial reaction center (RC). Crystals of Fe-removed/Zn-replaced RC protein from Rhodobacter ( R.) sphaeroides R26 were irradiated with varied radiation doses at cryogenic temperature and analyzed for radiation-induced free radical formation and alteration of light-induced photosynthetic electron transfer activity using high-field (HF) D-band (130 GHz) and X-band (9.5 GHz) EPR spectroscopies. These analyses show that the formation of radiation-induced free radicals saturated at doses 1 order of magnitude smaller than the amount of radiation at which protein crystals lose their diffraction quality, while light-induced RC activity was found to be lost at radiation doses at least 1 order of magnitude lower than the dose at which radiation-induced radicals exhibited saturation. HF D-band EPR spectra provide direct evidence for radiation-induced reduction of the quinones and possibly other cofactors. These results demonstrate that substantial radiation damage is likely to have occurred during X-ray diffraction data collection used for photosynthetic RC structure determination. Thus, both radiation-induced loss of photochemical activity in RC crystals and reduction of the quinones are important factors that must be considered when correlating spectroscopic and crystallographic measurements of quinone site structures.
利用电子顺磁共振(EPR)同时研究细菌反应中心(RC)单晶中辐射诱导的辅因子还原和损伤自由基的形成。在低温下,用不同辐射剂量照射来自球形红细菌(R.)sphaeroides R26的去除铁/取代锌的RC蛋白晶体,并使用高场(HF)D波段(130 GHz)和X波段(9.5 GHz)EPR光谱分析辐射诱导的自由基形成以及光诱导光合电子转移活性的变化。这些分析表明,辐射诱导自由基的形成在比蛋白质晶体失去衍射质量的辐射量小1个数量级的剂量下达到饱和,而发现光诱导的RC活性在比辐射诱导自由基表现出饱和的剂量至少低1个数量级的辐射剂量下丧失。HF D波段EPR光谱为辐射诱导的醌类以及可能的其他辅因子的还原提供了直接证据。这些结果表明,在用于光合RC结构测定的X射线衍射数据收集过程中可能发生了大量辐射损伤。因此,RC晶体中辐射诱导的光化学活性丧失和醌类还原都是在关联醌位点结构的光谱测量和晶体学测量时必须考虑的重要因素。