Ten Leonid N, Xu Jin-Li, Jin Feng-Xie, Im Wan-Taek, Oh Hee-Mock, Lee Sung-Taik
Department of Biology and Medicinal Science, Pai Chai University, 14 Yeonja-1-Gil, Seo-Gu, Daejeon, 302-735, Republic of Korea.
Int J Syst Evol Microbiol. 2009 Feb;59(Pt 2):331-5. doi: 10.1099/ijs.0.002436-0.
A Gram-negative, yellowish bacterial strain, designated Gsoil 1519(T), was isolated from soil of a ginseng field in Pocheon province (South Korea) and characterized using a polyphasic approach to determine its taxonomic position. Comparative 16S rRNA gene sequence analysis showed that strain Gsoil 1519(T) belongs to the family 'Flexibacteraceae' and is related to Spirosoma rigui KCTC 12531(T) (91.8 % similarity) and Spirosoma linguale LMG 10896(T) (91.5 % similarity). Phylogenetic distances from any other recognized species within the family 'Flexibacteraceae' were greater than 14.7 %. The G+C content of the genomic DNA of strain Gsoil 1519(T) was 50.1 %. The detection of MK-7 as the predominant menaquinone and a fatty acid profile with C(16 : 1)omega5c, summed feature 4 (C(16 : 1)omega7c and/or iso-C(15 : 0) 2-OH), iso-C(15 : 0) and C(16 : 0) as the major acids supported the affiliation of strain Gsoil 1519(T) to the genus Spirosoma. On the basis of its phenotypic properties and phylogenetic distinctiveness, strain Gsoil 1519(T) should be classified in the genus Spirosoma as a representative of a novel species, for which the name Spirosoma panaciterrae sp. nov. is proposed. The type strain is Gsoil 1519(T) (=KCTC 22263(T)=DSM 21099(T)).
从韩国抱川市人参田土壤中分离出一株革兰氏阴性、淡黄色的细菌菌株,命名为Gsoil 1519(T),并采用多相分类法对其进行特征分析以确定其分类地位。16S rRNA基因序列比较分析表明,菌株Gsoil 1519(T)属于“弯曲杆菌科”,与瑞氏螺旋体菌KCTC 12531(T)(相似度91.8%)和舌螺旋体菌LMG 10896(T)(相似度91.5%)相关。与“弯曲杆菌科”内其他任何已确认物种的系统发育距离均大于14.7%。菌株Gsoil 1519(T)基因组DNA的G+C含量为50.1%。以MK-7作为主要甲基萘醌,以C(16 : 1)ω5c、总和特征4(C(16 : 1)ω7c和/或异-C(15 : 0) 2-OH)、异-C(15 : 0)和C(16 : 0)作为主要脂肪酸的脂肪酸谱支持菌株Gsoil 1519(T)属于螺旋体属。基于其表型特征和系统发育独特性,菌株Gsoil 1519(T)应归类于螺旋体属,作为一个新物种的代表,为此提出新名称人参螺旋体菌(Spirosoma panaciterrae sp. nov.)。模式菌株为Gsoil 1519(T)(=KCTC 22263(T)=DSM 21099(T))。