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土壤螺旋体属的一个新种,分离自韩国济州岛的土壤。

Spirosoma terrae sp. nov., Isolated from Soil from Jeju Island, Korea.

机构信息

School of Applied Biosciences, Kyungpook National University, Daegu, 41566, Republic of Korea.

Department of Environmental Engineering, Kyungpook National University, Daegu, 41566, Republic of Korea.

出版信息

Curr Microbiol. 2018 Apr;75(4):492-498. doi: 10.1007/s00284-017-1408-6. Epub 2017 Dec 5.

Abstract

The taxonomic position of bacterial strain, designated 15J9-4, recovered from a beach soil sample on Jeju Island, South Korea, was established using a polyphasic approach. Strain 15J9-4 was assigned to phylum Bacteroidetes within the family Cytophagaceae based on 16S rRNA gene similarities. The closest phylogenetic relatives with validly published names were Spirosoma panaciterrae Gsoil 1519 (94.2% similarity) and Spirosoma luteolum 16F6E (94.1%). Cells were rod-shaped, Gram-stain-negative, and non-motile. The isolate grew on NA, R2A, TSA, and LB agar. The temperature limits for growth were 10 and 30 °C with an optimum at 25 °C and the pH range was 7-8. Menaquinone MK-7 was the predominant respiratory quinone. The major cellular fatty acids comprised summed feature 3 (C ω6c/C ω7c, 30.2%), C ω5c (22.2%), iso C (12.9%), and C (8.8%). Phosphatidylethanolamine was identified as the major polar lipid. The G+C content of the genomic DNA was 48.4 mol%. The results obtained from the polyphasic analyses allowed for the genotypic and phenotypic differentiation of strain 15J9-4 from recognized Spirosoma species. Therefore, the isolate is considered to represent a novel species in the genus Spirosoma, for which the name Spirosoma terrae sp. nov. is proposed. The type strain is 15J9-4 (= KCTC 52035 = JCM 31994).

摘要

从韩国济州岛海滩土壤样本中分离得到的细菌菌株 15J9-4 的分类地位采用多相分类法确定。根据 16S rRNA 基因相似性,菌株 15J9-4 被归入拟杆菌门的噬胞菌科。具有有效发表名称的最接近的系统发育近亲是 Gsoil 1519 属的 Panaciterrae Spirosoma(94.2%相似性)和 Spirosoma luteolum 16F6E(94.1%相似性)。细胞呈杆状,革兰氏阴性,不运动。该分离株在 NA、R2A、TSA 和 LB 琼脂上生长。生长的温度限制为 10-30°C,最适温度为 25°C,pH 值范围为 7-8。menaquinone MK-7 是主要的呼吸醌。主要的细胞脂肪酸由 sum feature 3(C ω6c/C ω7c,30.2%)、C ω5c(22.2%)、iso C(12.9%)和 C(8.8%)组成。鉴定出磷脂酰乙醇胺是主要的极性脂质。基因组 DNA 的 G+C 含量为 48.4 mol%。多相分析的结果允许 15J9-4 菌株与公认的 Spirosoma 物种在基因型和表型上进行区分。因此,该分离株被认为代表 Spirosoma 属的一个新种,提议将其命名为 Spirosoma terrae sp. nov.。模式菌株为 15J9-4(= KCTC 52035 = JCM 31994)。

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