School of Applied Biosciences, Kyungpook National University, Daegu, 41566, Republic of Korea.
Department of Environmental Engineering, Kyungpook National University, Daegu, 41566, Republic of Korea.
Curr Microbiol. 2018 Apr;75(4):492-498. doi: 10.1007/s00284-017-1408-6. Epub 2017 Dec 5.
The taxonomic position of bacterial strain, designated 15J9-4, recovered from a beach soil sample on Jeju Island, South Korea, was established using a polyphasic approach. Strain 15J9-4 was assigned to phylum Bacteroidetes within the family Cytophagaceae based on 16S rRNA gene similarities. The closest phylogenetic relatives with validly published names were Spirosoma panaciterrae Gsoil 1519 (94.2% similarity) and Spirosoma luteolum 16F6E (94.1%). Cells were rod-shaped, Gram-stain-negative, and non-motile. The isolate grew on NA, R2A, TSA, and LB agar. The temperature limits for growth were 10 and 30 °C with an optimum at 25 °C and the pH range was 7-8. Menaquinone MK-7 was the predominant respiratory quinone. The major cellular fatty acids comprised summed feature 3 (C ω6c/C ω7c, 30.2%), C ω5c (22.2%), iso C (12.9%), and C (8.8%). Phosphatidylethanolamine was identified as the major polar lipid. The G+C content of the genomic DNA was 48.4 mol%. The results obtained from the polyphasic analyses allowed for the genotypic and phenotypic differentiation of strain 15J9-4 from recognized Spirosoma species. Therefore, the isolate is considered to represent a novel species in the genus Spirosoma, for which the name Spirosoma terrae sp. nov. is proposed. The type strain is 15J9-4 (= KCTC 52035 = JCM 31994).
从韩国济州岛海滩土壤样本中分离得到的细菌菌株 15J9-4 的分类地位采用多相分类法确定。根据 16S rRNA 基因相似性,菌株 15J9-4 被归入拟杆菌门的噬胞菌科。具有有效发表名称的最接近的系统发育近亲是 Gsoil 1519 属的 Panaciterrae Spirosoma(94.2%相似性)和 Spirosoma luteolum 16F6E(94.1%相似性)。细胞呈杆状,革兰氏阴性,不运动。该分离株在 NA、R2A、TSA 和 LB 琼脂上生长。生长的温度限制为 10-30°C,最适温度为 25°C,pH 值范围为 7-8。menaquinone MK-7 是主要的呼吸醌。主要的细胞脂肪酸由 sum feature 3(C ω6c/C ω7c,30.2%)、C ω5c(22.2%)、iso C(12.9%)和 C(8.8%)组成。鉴定出磷脂酰乙醇胺是主要的极性脂质。基因组 DNA 的 G+C 含量为 48.4 mol%。多相分析的结果允许 15J9-4 菌株与公认的 Spirosoma 物种在基因型和表型上进行区分。因此,该分离株被认为代表 Spirosoma 属的一个新种,提议将其命名为 Spirosoma terrae sp. nov.。模式菌株为 15J9-4(= KCTC 52035 = JCM 31994)。