Li Weilan, Ten Leonid N, Lee Seung-Yeol, Lee Dong Hoon, Jung Hee-Young
School of Applied Biosciences, Kyungpook National University, Daegu, 41566, Republic of Korea.
Planning and Coordination Division, National Institute of Horticultural and Herbal Science, RDA, Wanju, 55365, Republic of Korea.
Arch Microbiol. 2018 Apr;200(3):431-438. doi: 10.1007/s00203-017-1453-3. Epub 2017 Nov 29.
A Gram-negative, non-motile, rod-shaped, aerobic bacterial strain, designated S2-3-6, was isolated from soil in Jeollabuk-do province, South Korea, and was characterized taxonomically using a polyphasic approach. According to a comparative 16S rRNA gene sequence analysis, strain S2-3-6 belonged to the family Cytophagaceae and was most closely related to Spirosoma endophyticum EX36 (98.2%), Spirosoma fluviale MSd3 (96.0%), and Spirosoma linguale DSM 74 (95.7%). Strain S2-3-6 contained summed feature 3 (C16:1 ω7c/C16:1 ω6c), C16:1 ω5c, and C16:0 N alcohol as major cellular fatty acids, MK-7 as the predominant respiratory quinone, and phosphatidylethanolamine as the main polar lipid. The DNA G+C content of strain S2-3-6 was 47.8%. Phenotypic and chemotaxonomic data supported the affiliation of strain S2-3-6 to the genus Spirosoma. However, the DNA-DNA relatedness between strain S2-3-6 and Spirosoma endophyticum KACC 17920 was 27%, clearly showing that the isolate constitutes a new genospecies. Strain S2-3-6 could be clearly differentiated from its closest neighbors based on its phenotypic, genotypic, and chemotaxonomic features. Therefore, strain S2-3-6 represents a novel species of the genus Spirosoma, for which the name Spirosoma jeollabukense sp. nov. is proposed. The type strain is S2-3-6 (= KCTC 52725 = JCM 32129).
从韩国全罗北道的土壤中分离出一株革兰氏阴性、无运动性、杆状、需氧的细菌菌株,命名为S2-3-6,并采用多相分类法对其进行分类学特征分析。通过比较16S rRNA基因序列分析,菌株S2-3-6属于噬纤维菌科,与内生螺旋体EX36(98.2%)、河流螺旋体MSd3(96.0%)和舌螺旋体DSM 74(95.7%)关系最为密切。菌株S2-3-6的主要细胞脂肪酸为特征性总和3(C16:1 ω7c/C16:1 ω6c)、C16:1 ω5c和C16:0 N醇,主要呼吸醌为MK-7,主要极性脂为磷脂酰乙醇胺。菌株S2-3-6的DNA G+C含量为47.8%。表型和化学分类学数据支持菌株S2-3-6属于螺旋体属。然而,菌株S2-3-6与内生螺旋体KACC 17920之间的DNA-DNA相关性为27%,清楚地表明该分离株构成一个新的基因种。菌株S2-3-6可根据其表型、基因型和化学分类学特征与其最接近的菌株明显区分开来。因此,菌株S2-3-6代表螺旋体属的一个新物种,为此提出名为全罗北道螺旋体(Spirosoma jeollabukense sp. nov.)的名称。模式菌株为S2-3-6(=KCTC 52725=JCM 32129)。