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通过 FISH-SIMS 揭示结构共生体中甲烷营养型 ANME-2 古菌和硫酸盐还原菌的 15N 同化和生长模式。

Patterns of 15N assimilation and growth of methanotrophic ANME-2 archaea and sulfate-reducing bacteria within structured syntrophic consortia revealed by FISH-SIMS.

机构信息

Division of Geological and Planetary Sciences, California Institute of Technology, Pasadena, CA 91125, USA.

出版信息

Environ Microbiol. 2009 Jul;11(7):1777-91. doi: 10.1111/j.1462-2920.2009.01903.x. Epub 2009 Apr 6.

DOI:10.1111/j.1462-2920.2009.01903.x
PMID:19383036
Abstract

Methane release from the oceans is controlled in large part by syntrophic interactions between anaerobic methanotrophic archaea (ANME) and sulfate-reducing bacteria (DSS), frequently found as organized consortia. An understanding of the specifics of this symbiotic relationship and the metabolic heterogeneity existing between and within individual methane-oxidizing aggregates is currently lacking. Here, we use the microanalytical method FISH-SIMS (fluorescence in situ hybridization-secondary ion mass spectrometry) to describe the physiological traits and anabolic activity of individual methanotrophic consortia, specifically tracking (15)N-labelled protein synthesis to examine the effects of organization and size on the metabolic activity of the syntrophic partners. Patterns of (15)N distribution within individual aggregates showed enhanced (15)N assimilation in ANME-2 cells relative to the co-associated DSS revealing a decoupling in anabolic activity between the partners. Protein synthesis in ANME-2 cells was sustained throughout the core of individual ANME-2/DSS consortia ranging in size range from 4 to 20 μm. This indicates that metabolic activity of the methane-oxidizing archaea is not limited to, or noticeably enhanced at the ANME-2/DSS boundary. Overall, the metabolic activity of both syntrophic partners within consortia was greater than activity measured in representatives of the ANME-2 and DSS observed alone, with smaller ANME-2/DSS aggregates displaying a tendency for greater (15)N uptake and doubling times ranging from 3 to 5 months. The combination of (15)N-labelling and FISH-SIMS provides an important perspective on the extent of heterogeneity within methanotrophic aggregates and may aid in constraining predictive models of activity and growth by these syntrophic consortia.

摘要

海洋中的甲烷释放在很大程度上受到厌氧甲烷营养古菌 (ANME) 和硫酸盐还原菌 (DSS) 之间的共生相互作用的控制,这些细菌通常以有组织的联合体形式存在。目前,人们对这种共生关系的具体细节以及单个甲烷氧化聚集体内部和之间存在的代谢异质性缺乏了解。在这里,我们使用微分析方法 FISH-SIMS(荧光原位杂交-二次离子质谱)来描述单个甲烷营养共生体的生理特征和合成代谢活性,特别是跟踪(15)N 标记的蛋白质合成,以研究组织化和大小对共生伙伴代谢活性的影响。单个聚集体内(15)N 分布的模式表明,与共生相关的 DSS 相比,ANME-2 细胞中的(15)N 同化增强,这揭示了共生伙伴之间的同化活性的解耦。ANME-2 细胞中的蛋白质合成在单个 ANME-2/DSS 共生体的核心中持续进行,其大小范围从 4 到 20 μm。这表明甲烷氧化古菌的代谢活性不仅限于或在 ANME-2/DSS 边界处明显增强。总的来说,共生体中两种共生伙伴的代谢活性均大于单独观察到的 ANME-2 和 DSS 的活性,较小的 ANME-2/DSS 聚集体显示出更大的(15)N 吸收和倍增时间的趋势,范围从 3 到 5 个月。(15)N 标记和 FISH-SIMS 的结合为甲烷氧化聚集体内异质性的程度提供了一个重要的视角,并可能有助于通过这些共生联合体来约束对活性和生长的预测模型。

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