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基于全切片图像的神经母细胞瘤计算机辅助预后评估:基质发育分类

Computer-aided Prognosis of Neuroblastoma on Whole-slide Images: Classification of Stromal Development.

作者信息

Sertel O, Kong J, Shimada H, Catalyurek U V, Saltz J H, Gurcan M N

机构信息

Department of Electrical and Computer Engineering, The Ohio State University, 2015 Neil Ave, Columbus OH, 43210.

出版信息

Pattern Recognit. 2009 Jun;42(6):1093-1103. doi: 10.1016/j.patcog.2008.08.027.

Abstract

We are developing a computer-aided prognosis system for neuroblastoma (NB), a cancer of the nervous system and one of the most malignant tumors affecting children. Histopathological examination is an important stage for further treatment planning in routine clinical diagnosis of NB. According to the International Neuroblastoma Pathology Classification (the Shimada system), NB patients are classified into favorable and unfavorable histology based on the tissue morphology. In this study, we propose an image analysis system that operates on digitized H&E stained whole-slide NB tissue samples and classifies each slide as either stroma-rich or stroma-poor based on the degree of Schwannian stromal development. Our statistical framework performs the classification based on texture features extracted using co-occurrence statistics and local binary patterns. Due to the high resolution of digitized whole-slide images, we propose a multi-resolution approach that mimics the evaluation of a pathologist such that the image analysis starts from the lowest resolution and switches to higher resolutions when necessary. We employ an offine feature selection step, which determines the most discriminative features at each resolution level during the training step. A modified k-nearest neighbor classifier is used to determine the confidence level of the classification to make the decision at a particular resolution level. The proposed approach was independently tested on 43 whole-slide samples and provided an overall classification accuracy of 88.4%.

摘要

我们正在开发一种用于神经母细胞瘤(NB)的计算机辅助预后系统,神经母细胞瘤是一种神经系统癌症,也是影响儿童的最恶性肿瘤之一。组织病理学检查是NB常规临床诊断中进一步治疗规划的重要阶段。根据国际神经母细胞瘤病理分类(岛田系统),NB患者根据组织形态学分为预后良好和预后不良组织学类型。在本研究中,我们提出了一种图像分析系统,该系统对数字化苏木精和伊红(H&E)染色的NB全组织切片样本进行操作,并根据施万细胞基质发育程度将每张切片分类为富含基质或基质贫乏。我们的统计框架基于使用共生统计和局部二值模式提取的纹理特征进行分类。由于数字化全组织切片图像的高分辨率,我们提出了一种多分辨率方法,该方法模仿病理学家的评估方式,即图像分析从最低分辨率开始,必要时切换到更高分辨率。我们采用离线特征选择步骤,该步骤在训练步骤中确定每个分辨率级别上最具区分性的特征。使用改进的k近邻分类器来确定分类的置信水平,以便在特定分辨率级别上做出决策。所提出的方法在43个全组织切片样本上进行了独立测试,总体分类准确率为88.4%。

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