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将人参利夫森氏菌(Qiu 等人,2007 年)重新分类为 Herbiconiux ginsengi 属,新组合,以及与马铃薯叶片相关的放线菌 Herbiconiux solani sp. nov. 的描述。

Reclassification of Leifsonia ginsengi (Qiu et al. 2007) as Herbiconiux ginsengi gen. nov., comb. nov. and description of Herbiconiux solani sp. nov., an actinobacterium associated with the phyllosphere of Solanum tuberosum L.

机构信息

Leibniz-Centre for Agricultural Landscape Research (ZALF), Institute of Landscape Matter Dynamics, Eberswalder Str. 84, D-15374 Müncheberg, Germany.

DSMZ-German Collection of Microorganisms and Cell Cultures, Inhoffenstraße 7B, D-38124 Braunschweig, Germany.

出版信息

Int J Syst Evol Microbiol. 2011 May;61(Pt 5):1039-1047. doi: 10.1099/ijs.0.021352-0. Epub 2010 May 28.

DOI:10.1099/ijs.0.021352-0
PMID:20511458
Abstract

In the context of studying the effects of transgenic fructan-producing potatoes on the community structure of phyllosphere bacteria, a group of strains closely related to the species Leifsonia ginsengi was isolated. Phylogenetic analysis based on 16S rRNA gene sequences revealed that the new isolates and L. ginsengi DSM 19088(T) formed a lineage at the genus level and this finding was supported by chemotaxonomic characterization. The peptidoglycan type of the representative isolate, K134/01(T), and L. ginsengi DSM 19088(T) was B2γ, with d- and l-diaminobutyric acid as the diagnostic diamino acid and glycine, alanine and threo-3-hydroxyglutamic acid. The almost-complete substitution of glutamic acid by threo-3-hydroxyglutamic acid supported the differentiation of the new strains from recognized species of the genus Leifsonia. Furthermore, the detection of substantial amounts of the fatty acid cyclohexyl-C(17 : 0) in the new isolates and L. ginsengi DSM 19088(T) was a prominent chemotaxonomic feature for a clear demarcation of these strains from all genera of the family Microbacteriaceae that display the B2γ cell-wall type. Comparative phylogenetic and phenotypic analyses of the isolates and L. ginsengi DSM 19088(T) revealed the separate species status of the isolates. On the basis of these results, it is proposed that L. ginsengi should be classified as the type species of a novel genus, Herbiconiux gen. nov., with the name Herbiconiux ginsengi gen. nov., comb. nov. (type strain wged11(T) = CGMCC 4.3491(T) = JCM 13908(T) = DSM 19088(T) = NBRC 104580(T)). The phyllosphere isolates are assigned to a novel species, Herbiconiux solani sp. nov. (type strain K134/01(T) = DSM 19813(T) = LMG 24387(T) = NBRC 106740(T)).

摘要

在研究转果糖基生产马铃薯对叶际细菌群落结构的影响的过程中,分离到了一组与人参利夫森氏菌密切相关的菌株。基于 16S rRNA 基因序列的系统发育分析表明,新分离株和人参利夫森氏菌 DSM 19088(T)在属水平上形成了一个谱系,这一发现得到了化学分类特征的支持。代表菌株 K134/01(T)和人参利夫森氏菌 DSM 19088(T)的肽聚糖类型为 B2γ,其特征性二氨基庚二酸为 d-和 l-二氨基丁酸以及甘氨酸、丙氨酸和苏-3-羟基谷氨酸。苏-3-羟基谷氨酸对谷氨酸的几乎完全取代支持了这些新菌株与利夫森氏菌属的公认种的分化。此外,新分离株和人参利夫森氏菌 DSM 19088(T)中大量存在的环己基-C(17:0)脂肪酸是这些菌株与所有具有 B2γ 细胞壁类型的微杆菌科属种明显区分的化学分类特征。对分离株和人参利夫森氏菌 DSM 19088(T)的比较系统发育和表型分析表明,这些分离株具有独立的种的地位。基于这些结果,建议将人参利夫森氏菌分类为一个新属 Herbiconiux 的模式种,新属名称 Herbiconiux ginsengi gen. nov.,组合新名称 Herbiconiux ginsengi comb. nov.(模式菌株 wged11(T)=CGMCC 4.3491(T)=JCM 13908(T)=DSM 19088(T)=NBRC 104580(T))。叶际分离株被分配到一个新种,即 Herbiconiux solani sp. nov.(模式菌株 K134/01(T)=DSM 19813(T)=LMG 24387(T)=NBRC 106740(T))。

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