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一个工程化的哺乳动物带通网络。

An engineered mammalian band-pass network.

机构信息

Department of Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, CH-4058 Basel, Switzerland.

出版信息

Nucleic Acids Res. 2010 Oct;38(18):e174. doi: 10.1093/nar/gkq671. Epub 2010 Aug 6.

Abstract

Gene expression circuitries, which enable cells to detect precise levels within a morphogen concentration gradient, have a pivotal impact on biological processes such as embryonic pattern formation, paracrine and autocrine signalling, and cellular migration. We present the rational synthesis of a synthetic genetic circuit exhibiting band-pass detection characteristics. The components, involving multiply linked mammalian trans-activator and -repressor control systems, were selected and fine-tuned to enable the detection of 'low-threshold' morphogen (tetracycline) concentrations, in which target gene expression was triggered, and a 'high-threshold' concentration, in which expression was muted. In silico predictions and supporting experimental findings indicated that the key criterion for functional band-pass detection was the matching of componentry that enabled sufficient separation of the low and high threshold points. Using the circuitry together with a fluorescence-encoded target gene, mammalian cells were genetically engineered to be capable of forming a band-like pattern of differentiation in response to a tetracycline chemical gradient. Synthetic gene networks designed to emulate naturally occurring gene behaviours provide not only insight into biological processes, but may also foster progress in future tissue engineering, gene therapy and biosensing applications.

摘要

基因表达电路使细胞能够检测到形态发生素浓度梯度中的精确水平,对生物过程具有关键影响,如胚胎模式形成、旁分泌和自分泌信号传递以及细胞迁移。我们提出了一种具有带通检测特性的合成遗传电路的合理合成。所涉及的组件包括多链接的哺乳动物转录激活子和转录阻遏子控制系统,经过选择和微调,以实现对“低阈值”形态发生素(四环素)浓度的检测,在此浓度下触发靶基因表达,以及“高阈值”浓度,在此浓度下表达被抑制。计算机预测和支持性实验结果表明,功能带通检测的关键标准是组件的匹配,这使得低阈值和高阈值点能够充分分离。使用该电路和荧光编码的靶基因,对哺乳动物细胞进行基因工程改造,使其能够对四环素化学梯度形成带样分化模式。旨在模拟自然发生的基因行为的合成基因网络不仅提供了对生物过程的深入了解,而且还可能促进未来组织工程、基因治疗和生物传感应用的进展。

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