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利用病毒宏基因组学检测患有震颤水貂综合征的水貂脑组织中的一种新型星状病毒。

Detection of a novel astrovirus in brain tissue of mink suffering from shaking mink syndrome by use of viral metagenomics.

机构信息

Department of Biomedical Sciences and Veterinary Public Health, Section of Virology, Swedish University of Agricultural Sciences, Box 7036, S-750 07 Uppsala, Sweden.

出版信息

J Clin Microbiol. 2010 Dec;48(12):4392-6. doi: 10.1128/JCM.01040-10. Epub 2010 Oct 6.

Abstract

In 2000, farmed mink kits in Denmark were affected by a neurological disorder. The characteristic clinical signs included shaking, staggering gait, and ataxia. The disease, given the name shaking mink syndrome, was reproduced by the inoculation of brain homogenate from affected mink kits into healthy ones. However, the etiology remained unknown despite intensive efforts. In this study, random amplification and large-scale sequencing were used, and an astrovirus was detected in the brain tissue of three experimentally infected mink kits. This virus also was found in the brain of three mink kits naturally displaying the disease but not in the six healthy animals investigated. The complete coding region of the detected astrovirus was sequenced and compared to those of both a mink astrovirus associated with preweaning diarrhea and to a recently discovered human astrovirus associated with a case of encephalitis in a boy with x-linked agammaglobulinemia. The identities were 80.4 and 52.3%, respectively, showing that the virus described in this study was more similar to the preweaning diarrhea mink astrovirus. For the nonstructural coding regions the sequence identity was around 90% compared to that of the astrovirus, which is associated with preweaning diarrhea in mink. The region coding for the structural protein was more diverse, showing only 67% sequence identity. This finding is of interest not only because the detected virus may be the etiological agent of the shaking mink syndrome but also because this is one of the first descriptions of an astrovirus found in the central nervous system of animals.

摘要

2000 年,丹麦养殖的水貂幼崽受到一种神经系统疾病的影响。其特征性临床症状包括颤抖、蹒跚步态和共济失调。这种疾病被命名为颤抖水貂综合征,通过接种患病水貂幼崽的脑组织到健康幼崽中可再现该疾病。然而,尽管进行了深入的研究,但病因仍不清楚。在这项研究中,使用随机扩增和大规模测序技术,在 3 只实验感染水貂幼崽的脑组织中检测到一种星状病毒。该病毒也在 3 只自然患病水貂幼崽的脑组织中被发现,但在 6 只健康动物的脑组织中未被发现。检测到的星状病毒的完整编码区被测序,并与与断奶前腹泻相关的水貂星状病毒和最近发现的与患有 X 连锁无丙种球蛋白血症男孩的脑炎相关的人类星状病毒进行了比较。其分别具有 80.4%和 52.3%的同一性,表明本研究中描述的病毒与与断奶前腹泻相关的水貂星状病毒更为相似。对于非结构编码区,与与断奶前腹泻相关的星状病毒相比,其序列同一性约为 90%。编码结构蛋白的区域更为多样化,仅显示 67%的序列同一性。这一发现不仅因为所检测到的病毒可能是颤抖水貂综合征的病因,而且因为这是首次在动物中枢神经系统中发现星状病毒的描述之一。

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