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基于高分辨魔角旋转(HR-MAS)信号的肿瘤组织分型非负盲源分离技术

Non-negative blind source separation techniques for tumor tissue typing using HR-MAS signals.

作者信息

Croitor Sava A, Sima D M, Martinez-Bisbal M C, Celda B, Van Huffel S

机构信息

Department of Electrical Engineering (ESAT-SCD) - Biomed, Katholieke Universiteit Leuven, Belgium.

出版信息

Annu Int Conf IEEE Eng Med Biol Soc. 2010;2010:3658-61. doi: 10.1109/IEMBS.2010.5627436.

DOI:10.1109/IEMBS.2010.5627436
PMID:21096855
Abstract

Given High Resolution Magic Angle Spinning (HR-MAS) signals from several glioblastoma tumor subjects, the goal is to differentiate between tumor tissue types by separating the different sources that contribute to the profile of each spectrum. Blind source separation techniques are applied for obtaining characteristic profiles for necrosis, high cellular tumor and border tumor tissue, and providing the contribution (abundance) of each tumor tissue to the profile of the spectra. The problem is formulated as a non-negative source separation problem. We illustrate the effectiveness of the proposed methods and we analyze to which extent the dimension of the input space could influence the performance by comparing the results on the full magnitude signals and on dimensionally reduced spaces.

摘要

给定来自多个胶质母细胞瘤肿瘤受试者的高分辨率魔角旋转(HR-MAS)信号,目标是通过分离对每个光谱特征有贡献的不同来源,来区分肿瘤组织类型。应用盲源分离技术来获取坏死、高细胞性肿瘤和肿瘤边缘组织的特征谱,并提供每种肿瘤组织对光谱特征的贡献(丰度)。该问题被表述为一个非负源分离问题。我们通过比较全幅度信号和降维空间上的结果,说明了所提方法的有效性,并分析了输入空间的维度在多大程度上会影响性能。

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引用本文的文献

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Applications of high-resolution magic angle spinning MRS in biomedical studies II-Human diseases.高分辨率魔角旋转磁共振波谱在生物医学研究中的应用II-人类疾病
NMR Biomed. 2017 Nov;30(11). doi: 10.1002/nbm.3784. Epub 2017 Sep 15.
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Remote diffuse reflectance spectroscopy sensor for tissue engineering monitoring based on blind signal separation.基于盲信号分离的用于组织工程监测的远程漫反射光谱传感器
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A novel semi-supervised methodology for extracting tumor type-specific MRS sources in human brain data.
一种用于在人脑数据中提取肿瘤类型特异性磁共振波谱(MRS)源的新型半监督方法。
PLoS One. 2013 Dec 23;8(12):e83773. doi: 10.1371/journal.pone.0083773. eCollection 2013.