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嗜酸嗜热栖热放线菌模式菌株(104-IA)的全基因组序列

Complete genome sequence of Alicyclobacillus acidocaldarius type strain (104-IA).

作者信息

Mavromatis Konstantinos, Sikorski Johannes, Lapidus Alla, Glavina Del Rio Tijana, Copeland Alex, Tice Hope, Cheng Jan-Fang, Lucas Susan, Chen Feng, Nolan Matt, Bruce David, Goodwin Lynne, Pitluck Sam, Ivanova Natalia, Ovchinnikova Galina, Pati Amrita, Chen Amy, Palaniappan Krishna, Land Miriam, Hauser Loren, Chang Yun-Juan, Jeffries Cynthia D, Chain Patrick, Meincke Linda, Sims David, Chertkov Olga, Han Cliff, Brettin Thomas, Detter John C, Wahrenburg Claudia, Rohde Manfred, Pukall Rüdiger, Göker Markus, Bristow Jim, Eisen Jonathan A, Markowitz Victor, Hugenholtz Philip, Klenk Hans-Peter, Kyrpides Nikos C

出版信息

Stand Genomic Sci. 2010 Jan 28;2(1):9-18. doi: 10.4056/sigs.591104.

Abstract

Alicyclobacillus acidocaldarius (Darland and Brock 1971) is the type species of the larger of the two genera in the bacillal family 'Alicyclobacillaceae'. A. acidocaldarius is a free-living and non-pathogenic organism, but may also be associated with food and fruit spoilage. Due to its acidophilic nature, several enzymes from this species have since long been subjected to detailed molecular and biochemical studies. Here we describe the features of this organism, together with the complete genome sequence and annotation. This is the first completed genome sequence of the family 'Alicyclobacillaceae'. The 3,205,686 bp long genome (chromosome and three plasmids) with its 3,153 protein-coding and 82 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.

摘要

嗜酸 Alicyclobacillus(Darland 和 Brock,1971 年)是芽孢杆菌科“Alicyclobacillaceae”两个属中较大的那个属的模式种。嗜酸 Alicyclobacillus 是一种自由生活且无致病性的生物体,但也可能与食物和水果变质有关。由于其嗜酸特性,长期以来,该物种的几种酶一直受到详细的分子和生化研究。在此,我们描述了这种生物体的特征,以及完整的基因组序列和注释。这是“Alicyclobacillaceae”科的首个完整基因组序列。这个长度为 3,205,686 碱基对的基因组(染色体和三个质粒),包含 3,153 个蛋白质编码基因和 82 个 RNA 基因,是细菌和古菌基因组百科全书项目的一部分。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7738/3035248/4b873df5d4b5/sigs.591104-f1.jpg

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