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一株新型苏云金芽孢杆菌噬菌体的基因组特征与其来自蜡状芽孢杆菌的噬菌体高度相似。

Genome characteristics of a novel phage from Bacillus thuringiensis showing high similarity with phage from Bacillus cereus.

机构信息

Key Laboratory of Agricultural and Environmental Microbiology, Wuhan Institute of Virology, Chinese Academy of Sciences, Wuhan, People's Republic of China.

出版信息

PLoS One. 2012;7(5):e37557. doi: 10.1371/journal.pone.0037557. Epub 2012 May 23.

Abstract

Bacillus thuringiensis is an important entomopathogenic bacterium belongs to the Bacillus cereus group, which also includes B. anthracis and B. cereus. Several genomes of phages originating from this group had been sequenced, but no genome of Siphoviridae phage from B. thuringiensis has been reported. We recently sequenced and analyzed the genome of a novel phage, BtCS33, from a B. thuringiensis strain, subsp. kurstaki CS33, and compared the gneome of this phage to other phages of the B. cereus group. BtCS33 was the first Siphoviridae phage among the sequenced B. thuringiensis phages. It produced small, turbid plaques on bacterial plates and had a narrow host range. BtCS33 possessed a linear, double-stranded DNA genome of 41,992 bp with 57 putative open reading frames (ORFs). It had a typical genome structure consisting of three modules: the "late" region, the "lysogeny-lysis" region and the "early" region. BtCS33 exhibited high similarity with several phages, B. cereus phage Wβ and some variants of Wβ, in genome organization and the amino acid sequences of structural proteins. There were two ORFs, ORF22 and ORF35, in the genome of BtCS33 that were also found in the genomes of B. cereus phage Wβ and may be involved in regulating sporulation of the host cell. Based on these observations and analysis of phylogenetic trees, we deduced that B. thuringiensis phage BtCS33 and B. cereus phage Wβ may have a common distant ancestor.

摘要

苏云金芽孢杆菌是一种重要的昆虫病原细菌,属于芽孢杆菌属,该属还包括炭疽芽孢杆菌和蜡状芽孢杆菌。该属的几种噬菌体基因组已被测序,但尚未报道苏云金芽孢杆菌的长尾噬菌体基因组。我们最近对来自苏云金芽孢杆菌亚种 kurstaki CS33 的新型噬菌体 BtCS33 的基因组进行了测序和分析,并将该噬菌体的基因组与芽孢杆菌属的其他噬菌体进行了比较。BtCS33 是已测序的苏云金芽孢杆菌噬菌体中第一个长尾噬菌体。它在细菌平板上产生小而混浊的噬菌斑,宿主范围较窄。BtCS33 拥有一个线性、双链 DNA 基因组,大小为 41992bp,包含 57 个推定的开放阅读框 (ORF)。它具有典型的基因组结构,由三个模块组成:“晚期”区、“溶原-裂解”区和“早期”区。BtCS33 在基因组组织和结构蛋白的氨基酸序列上与几种噬菌体,如蜡状芽孢杆菌噬菌体 Wβ 和 Wβ 的一些变体,表现出高度相似性。BtCS33 基因组中有两个 ORF(ORF22 和 ORF35),也存在于蜡状芽孢杆菌噬菌体 Wβ 的基因组中,可能参与宿主细胞的孢子形成调控。基于这些观察结果和系统发育树分析,我们推断苏云金芽孢杆菌噬菌体 BtCS33 和蜡状芽孢杆菌噬菌体 Wβ 可能有一个共同的远祖。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1e9d/3359378/c3fd8228fcfb/pone.0037557.g001.jpg

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