School of Life Sciences, Ludong University, Yantai 264025, China.
World J Microbiol Biotechnol. 2012 May;28(5):2237-48. doi: 10.1007/s11274-012-1031-4. Epub 2012 Mar 7.
To evaluate the genetic diversity of Pleurotus citrinopileatus Singer cultivars in China, 20 P. citrinopileatus strains were analyzed using morphological traits, inter-simple sequence repeat (ISSR) and sequence-related amplified polymorphism (SRAP) molecular markers. Eleven ISSR primers amplified a total of 116 DNA fragments of which 96 (82.91%) were polymorphic, whereas 8 SRAP primer pairs amplified 69 fragments of which 65 (93.47%) were polymorphic. Phylogenetic trees constructed on the basis of ISSR, SRAP, and combined ISSR/SRAP analyses using the Unweighted Pair-group Method with Arithmetic Averages method distributed the 20 strains into three or six major groups. The grouping exhibited great similarity and was generally consistent with their morphological characters and antagonism test, which indicated a high level of genetic diversity among P. citrinopileatus Singer and relationship between each other. Based on the genetic analysis, the primary mini-core strains were constructed with progressive sampling method of the smallest genetic distance. The mini-core germplasm collection included 4 strains (strain 2, 5, 7 and 11). Our findings will provide a scientific fundament for facilitating parent selection for broadening genetic base, accelerating the genetic breeding, identification of cultivated strains and the development of bioactive products from this commercially important medicinal mushroom.
为评估中国金顶侧耳栽培品种的遗传多样性,本研究采用形态学特征、简单重复间序列(ISSR)和序列相关扩增多态性(SRAP)分子标记对 20 株金顶侧耳菌株进行了分析。11 个 ISSR 引物共扩增出 116 个 DNA 片段,其中 96 个(82.91%)为多态性片段,而 8 对 SRAP 引物共扩增出 69 个片段,其中 65 个(93.47%)为多态性片段。基于 ISSR、SRAP 和 ISSR/SRAP 联合分析构建的基于非加权对组算术平均法的系统发育树将 20 个菌株分为 3 个或 6 个主要组。分组显示出很大的相似性,与它们的形态特征和拮抗试验基本一致,表明金顶侧耳具有很高的遗传多样性和相互之间的关系。基于遗传分析,采用最小遗传距离的逐步抽样法构建了主要的微型核心菌株。微型核心种质资源库包括 4 个菌株(菌株 2、5、7 和 11)。本研究结果将为促进亲本选择、扩大遗传基础、加速遗传育种、鉴定栽培菌株以及开发这种具有商业重要性的药用蘑菇的生物活性产物提供科学基础。