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使用多个共识水平的广义统计标签融合

Generalized Statistical Label Fusion using Multiple Consensus Levels.

作者信息

Xu Zhoubing, Asman Andrew J, Landman Bennett A

机构信息

Electrical Engineering, Vanderbilt University, Nashville, TN, USA 37235.

出版信息

Proc SPIE Int Soc Opt Eng. 2012 Feb 23;8314. doi: 10.1117/12.910918.

DOI:10.1117/12.910918
PMID:22977295
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3438516/
Abstract

Segmentation plays a critical role in exposing connections between biological structure and function. The process of label fusion collects and combines multiple observations into a single estimate. Statistically driven techniques provide mechanisms to optimally combine segmentations; yet, optimality hinges upon accurate modeling of rater behavior. Traditional approaches, e.g., Majority Vote and Simultaneous Truth and Performance Level Estimation (STAPLE), have been shown to yield excellent performance in some cases, but do not account for spatial dependences of rater performance (i.e., regional task difficulty). Recently, the COnsensus Level, Labeler Accuracy and Truth Estimation (COLLATE) label fusion technique augmented the seminal STAPLE approach to simultaneously estimate regions of relative consensus versus confusion along with rater performance. Herein, we extend the COLLATE framework to account for multiple consensus levels. Toward this end, we posit a generalized model of rater behavior of which Majority Vote, STAPLE, STAPLE Ignoring Consensus Voxels, and COLLATE are special cases. The new algorithm is evaluated with simulations and shown to yield improved performance in cases with complex region difficulties. Multi-COLLATE achieve these results by capturing different consensus levels. The potential impacts and applications of generative model to label fusion problems are discussed.

摘要

分割在揭示生物结构与功能之间的联系方面起着关键作用。标签融合过程将多个观察结果收集并合并为一个单一估计值。统计驱动技术提供了优化合并分割的机制;然而,最优性取决于对评分者行为的准确建模。传统方法,例如多数投票法和同时估计真值与性能水平法(STAPLE),在某些情况下已被证明具有出色的性能,但没有考虑评分者性能的空间依赖性(即区域任务难度)。最近,共识水平、标注者准确性和真值估计(COLLATE)标签融合技术扩展了开创性的STAPLE方法,以同时估计相对共识区域与混淆区域以及评分者性能。在此,我们扩展COLLATE框架以考虑多个共识水平。为此,我们提出了一个评分者行为的广义模型,多数投票法、STAPLE法、忽略共识体素的STAPLE法和COLLATE法都是该广义模型的特殊情况。通过模拟对新算法进行了评估,结果表明在区域难度复杂的情况下该算法性能有所提高。多COLLATE通过捕捉不同的共识水平实现了这些结果。讨论了生成模型对标签融合问题的潜在影响和应用。

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Generalized Statistical Label Fusion using Multiple Consensus Levels.使用多个共识水平的广义统计标签融合
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本文引用的文献

1
Characterizing and Optimizing Rater Performance for Internet-based Collaborative Labeling.基于互联网的协作标注中评分者表现的特征分析与优化
Proc SPIE Int Soc Opt Eng. 2011 Mar 3;7966. doi: 10.1117/12.878412.
2
Characterizing spatially varying performance to improve multi-atlas multi-label segmentation.表征空间变化的性能以改进多图谱多标签分割。
Inf Process Med Imaging. 2011;22:85-96. doi: 10.1007/978-3-642-22092-0_8.
3
Robust statistical label fusion through COnsensus Level, Labeler Accuracy, and Truth Estimation (COLLATE).
通过一致性水平、标注者准确率和真值估计(COLLATE)实现稳健的统计标签融合。
IEEE Trans Med Imaging. 2011 Oct;30(10):1779-94. doi: 10.1109/TMI.2011.2147795. Epub 2011 Apr 29.
4
Foibles, Follies, and Fusion: Assessment of Statistical Label Fusion Techniques for Web-Based Collaborations using Minimal Training.弱点、 folly 与融合:使用最少训练对基于网络协作的统计标签融合技术的评估
Proc SPIE Int Soc Opt Eng. 2011;7962:79623G. doi: 10.1117/12.877471.
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Statistical Fusion of Surface Labels Provided by Multiple Raters.多位评估者提供的表面标签的统计融合
Proc SPIE Int Soc Opt Eng. 2010 Mar 1;7623. doi: 10.1117/12.844214.
6
Label fusion in atlas-based segmentation using a selective and iterative method for performance level estimation (SIMPLE).基于图谱的分割中的标签融合使用选择性和迭代方法进行性能水平估计 (SIMPLE)。
IEEE Trans Med Imaging. 2010 Dec;29(12):2000-8. doi: 10.1109/TMI.2010.2057442. Epub 2010 Jul 26.
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A generative model for image segmentation based on label fusion.基于标签融合的图像分割生成模型。
IEEE Trans Med Imaging. 2010 Oct;29(10):1714-29. doi: 10.1109/TMI.2010.2050897. Epub 2010 Jun 17.
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Combination strategies in multi-atlas image segmentation: application to brain MR data.多图谱图像分割中的组合策略:应用于脑部磁共振数据
IEEE Trans Med Imaging. 2009 Aug;28(8):1266-77. doi: 10.1109/TMI.2009.2014372. Epub 2009 Feb 18.
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Performance-based classifier combination in atlas-based image segmentation using expectation-maximization parameter estimation.基于期望最大化参数估计的基于图谱的图像分割中基于性能的分类器组合
IEEE Trans Med Imaging. 2004 Aug;23(8):983-94. doi: 10.1109/TMI.2004.830803.
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Simultaneous truth and performance level estimation (STAPLE): an algorithm for the validation of image segmentation.同步真值与性能水平估计(STAPLE):一种用于图像分割验证的算法。
IEEE Trans Med Imaging. 2004 Jul;23(7):903-21. doi: 10.1109/TMI.2004.828354.