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FRUIT,一种用于在大肠杆菌和沙门氏菌中进行靶向染色体诱变、表位标记和启动子替换的无疤痕系统。

FRUIT, a scar-free system for targeted chromosomal mutagenesis, epitope tagging, and promoter replacement in Escherichia coli and Salmonella enterica.

机构信息

Wadsworth Center, New York State Department of Health, Albany, New York, United States of America.

出版信息

PLoS One. 2012;7(9):e44841. doi: 10.1371/journal.pone.0044841. Epub 2012 Sep 27.

DOI:10.1371/journal.pone.0044841
PMID:23028641
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3459970/
Abstract

Recombineering is a widely-used approach to delete genes, introduce insertions and point mutations, and introduce epitope tags into bacterial chromosomes. Many recombineering methods have been described, for a wide range of bacterial species. These methods are often limited by (i) low efficiency, and/or (ii) introduction of "scar" DNA into the chromosome. Here, we describe a rapid, efficient, PCR-based recombineering method, FRUIT, that can be used to introduce scar-free point mutations, deletions, epitope tags, and promoters into the genomes of enteric bacteria. The efficiency of FRUIT is far higher than that of the most widely-used recombineering method for Escherichia coli. We have used FRUIT to introduce point mutations and epitope tags into the chromosomes of E. coli K-12, Enterotoxigenic E. coli, and Salmonella enterica. We have also used FRUIT to introduce constitutive and inducible promoters into the chromosome of E. coli K-12. Thus, FRUIT is a versatile, efficient recombineering approach that can be applied in multiple species of enteric bacteria.

摘要

基因重组是一种广泛应用于删除基因、引入插入和点突变以及在细菌染色体上引入表位标签的方法。已经描述了许多基因重组方法,适用于多种细菌物种。这些方法通常受到以下因素的限制:(i)效率低,和/或 (ii) 在染色体中引入“疤痕”DNA。在这里,我们描述了一种快速、高效、基于 PCR 的基因重组方法 FRUIT,可用于在肠道细菌的基因组中引入无疤痕点突变、缺失、表位标签和启动子。FRUIT 的效率远高于最广泛用于大肠杆菌的基因重组方法。我们已经使用 FRUIT 将点突变和表位标签引入大肠杆菌 K-12、肠致病性大肠杆菌和沙门氏菌的染色体中。我们还使用 FRUIT 将组成型和诱导型启动子引入大肠杆菌 K-12 的染色体中。因此,FRUIT 是一种通用、高效的基因重组方法,可应用于多种肠道细菌。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/67f9/3459970/d9e9fd8265db/pone.0044841.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/67f9/3459970/6b7650fdbc50/pone.0044841.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/67f9/3459970/eee2a80fb5f8/pone.0044841.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/67f9/3459970/bfbe169a05ab/pone.0044841.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/67f9/3459970/d9e9fd8265db/pone.0044841.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/67f9/3459970/6b7650fdbc50/pone.0044841.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/67f9/3459970/eee2a80fb5f8/pone.0044841.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/67f9/3459970/bfbe169a05ab/pone.0044841.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/67f9/3459970/d9e9fd8265db/pone.0044841.g004.jpg

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