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乙酰生成菌 Acetobacterium woodii 中的咖啡酸呼吸:辅酶 A 环为咖啡酸的激活保存能量。

Caffeate respiration in the acetogenic bacterium Acetobacterium woodii: a coenzyme A loop saves energy for caffeate activation.

机构信息

Molecular Microbiology & Bioenergetics, Institute of Molecular Biosciences, Johann Wolfgang Goethe University Frankfurt am Main, Frankfurt, Germany.

出版信息

Appl Environ Microbiol. 2013 Mar;79(6):1942-7. doi: 10.1128/AEM.03604-12. Epub 2013 Jan 11.

Abstract

The anaerobic acetogenic bacterium Acetobacterium woodii couples reduction of caffeate with electrons derived from molecular hydrogen to the synthesis of ATP by a chemiosmotic mechanism with sodium ions as coupling ions. Caffeate is activated to caffeyl coenzyme A (caffeyl-CoA) prior to its reduction, and the caffeate reduction operon encodes an ATP-dependent caffeyl-CoA synthetase that is thought to catalyze the initial caffeate activation. The operon also encodes a potential CoA transferase, the product of carA, which was thought to be involved in subsequent ATP-independent caffeate activation. To prove the proposed function of carA, we overproduced its protein in Escherichia coli and then purified it. Purified CarA drives the formation of caffeyl-CoA from caffeate with hydrocaffeyl-CoA as the CoA donor. The dependence of the reaction on caffeate and hydrocaffeyl-CoA followed Michaelis-Menten kinetics, with apparent K(m) values of 75 ± 5 μM for caffeate and 8 ± 2 μM for hydrocaffeyl-CoA. The enzyme activity had broad ranges of pH and temperature optima. In addition to being able to use caffeate, CarA could use p-coumarate and ferulate but not cinnamate, sinapate, or p-hydroxybenzoate as a CoA acceptor. Neither acetyl-CoA nor butyryl-CoA served as the CoA donor for CarA. The enzyme uses a ping-pong mechanism for CoA transfer and is the first classified member of a new subclass of family I CoA transferases that has two catalytic domains on one polypeptide chain. Apparently, CarA catalyzes an energy-saving CoA loop for caffeate activation in the steady state of caffeate respiration.

摘要

厌氧乙酰生成菌醋酸杆菌通过一种依赖钠离子的化学渗透机制将咖啡酸与来源于氢气的电子偶联,用于 ATP 的合成。咖啡酸在还原之前被激活为咖啡酰辅酶 A(caffeyl-CoA),并且咖啡酸还原操纵子编码一种依赖 ATP 的咖啡酰辅酶 A 合成酶,该酶被认为催化初始咖啡酸的激活。该操纵子还编码一种潜在的 CoA 转移酶,即 carA 的产物,该酶被认为参与随后的非依赖 ATP 的咖啡酸激活。为了证明 carA 的拟议功能,我们在大肠杆菌中过量表达了其蛋白质,然后对其进行了纯化。纯化的 CarA 从咖啡酸中驱动咖啡酰-CoA 的形成,以氢咖啡酰-CoA 为 CoA 供体。该反应对咖啡酸和氢咖啡酰-CoA 的依赖性遵循米氏-门肯动力学,对咖啡酸的表观 K(m)值为 75±5 μM,对氢咖啡酰-CoA 的表观 K(m)值为 8±2 μM。该酶的活性具有较宽的 pH 和温度最佳范围。除了能够使用咖啡酸外,CarA 还可以使用对香豆酸和阿魏酸,但不能使用肉桂酸、丁香酸或对羟基苯甲酸作为 CoA 受体。乙酰辅酶 A 或丁酰辅酶 A 均不作为 CarA 的 CoA 供体。该酶使用乒乓机制进行 CoA 转移,是家族 I CoA 转移酶的一个新亚类的第一个分类成员,该酶在一条多肽链上具有两个催化结构域。显然,CarA 催化了咖啡酸在咖啡酸呼吸的稳态下的能量节约型 CoA 循环激活。

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