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一株来自土壤的放线菌——武缘链霉菌。

Streptomyces wuyuanensis sp. nov., an actinomycete from soil.

机构信息

School of Life Science, Beijing Institute of Technology, Beijing 100081, PR China.

China General Microbiological Culture Collection Center, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, PR China.

出版信息

Int J Syst Evol Microbiol. 2013 Aug;63(Pt 8):2945-2950. doi: 10.1099/ijs.0.047050-0. Epub 2013 Jan 25.

DOI:10.1099/ijs.0.047050-0
PMID:23355697
Abstract

A novel actinomycete, strain FX61(T), was isolated from a saline sample collected from the Inner Mongolian Autonomous Region in China and subjected to a taxonomic study using a polyphasic approach. The predominant menaquinones were MK-9(H6), MK-9(H8) and MK-9(H4). The major fatty acids were iso-C16 : 0, anteiso-C15 : 0, iso-C15 : 0, iso-C16 : 1 H, C16 : 0, iso-C14 : 0 and anteiso-C17 : 0. The phospholipid profile contained diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, phosphatidylinositol, two phosphatidylinositol mannosides and an unidentified phospholipid. The G+C content of the genomic DNA was 72 mol%. The 16S rRNA gene sequence of the isolate had greater than 98 % similarity with those of Streptomyces griseoincarnatus ATCC 23623(T) (98.2 %), Streptomyces labedae DSM 41446(T) (98.2 %), Streptomyces variabilis ATCC 19815(T) (98.2 %), Streptomyces erythrogriseus ATCC 27427(T) (98.2 %), Streptomyces matensis ATCC 23935(T) (98.2 %), Streptomyces althioticus ATCC 19724(T) (98.2 %) and Streptomyces luteosporeus ATCC 33049(T) (98.0 %), showing that the novel strain should be assigned to the genus Streptomyces. DNA-DNA hybridizations with the seven above-mentioned members of the genus Streptomyces showed 29.8, 28.5, 27.0, 25.5, 25.0, 23.5 and 22.0 % relatedness, respectively. On the basis of the phenotypic characteristics and genotypic distinctiveness, strain FX61(T) should be classified as a novel species of the genus Streptomyces, for which the name Streptomyces wuyuanensis sp. nov. is proposed. The type strain is FX61(T) (= CGMCC 4.7042(T) = KCTC 29112(T)).

摘要

一株新的放线菌 FX61(T),从中国内蒙古自治区的一个盐样本中分离出来,通过多相分类学研究进行了分类学研究。主要的类异戊二烯醌为 MK-9(H6)、MK-9(H8)和 MK-9(H4)。主要脂肪酸为 iso-C16:0、anteiso-C15:0、iso-C15:0、iso-C16:1 H、C16:0、iso-C14:0 和 anteiso-C17:0。磷脂谱含有双磷脂酰甘油、磷脂酰甘油、磷脂酰乙醇胺、磷脂酰肌醇、两种磷脂酰肌醇甘露糖苷和一种未鉴定的磷脂。基因组 DNA 的 G+C 含量为 72mol%。该分离物的 16S rRNA 基因序列与灰色链霉菌 ATCC 23623(T)(98.2%)、拉贝链霉菌 DSM 41446(T)(98.2%)、变铅青链霉菌 ATCC 19815(T)(98.2%)、红褐链霉菌 ATCC 27427(T)(98.2%)、马氏链霉菌 ATCC 23935(T)(98.2%)、硫色链霉菌 ATCC 19724(T)(98.2%)和黄色链霉菌 ATCC 33049(T)(98.0%)的相似度大于 98%,表明该新菌株应属于链霉菌属。与上述七种链霉菌属的成员进行 DNA-DNA 杂交,其相关性分别为 29.8%、28.5%、27.0%、25.5%、25.0%、23.5%和 22.0%。基于表型特征和基因型特征,FX61(T)菌株应归类为链霉菌属的一个新种,命名为链霉菌武源亚种。模式菌株为 FX61(T)=CGMCC 4.7042(T)=KCTC 29112(T)。

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