• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

利用 Savage-Dickey 比率进行有效的后验概率映射。

Efficient posterior probability mapping using Savage-Dickey ratios.

机构信息

Wellcome Trust Centre for Neuroimaging, Institute of Neurology, University College, London, United Kingdom.

出版信息

PLoS One. 2013;8(3):e59655. doi: 10.1371/journal.pone.0059655. Epub 2013 Mar 22.

DOI:10.1371/journal.pone.0059655
PMID:23533640
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3606143/
Abstract

Statistical Parametric Mapping (SPM) is the dominant paradigm for mass-univariate analysis of neuroimaging data. More recently, a bayesian approach termed Posterior Probability Mapping (PPM) has been proposed as an alternative. PPM offers two advantages: (i) inferences can be made about effect size thus lending a precise physiological meaning to activated regions, (ii) regions can be declared inactive. This latter facility is most parsimoniously provided by PPMs based on bayesian model comparisons. To date these comparisons have been implemented by an Independent Model Optimization (IMO) procedure which separately fits null and alternative models. This paper proposes a more computationally efficient procedure based on Savage-Dickey approximations to the Bayes factor, and Taylor-series approximations to the voxel-wise posterior covariance matrices. Simulations show the accuracy of this Savage-Dickey-Taylor (SDT) method to be comparable to that of IMO. Results on fMRI data show excellent agreement between SDT and IMO for second-level models, and reasonable agreement for first-level models. This Savage-Dickey test is a bayesian analogue of the classical SPM-F and allows users to implement model comparison in a truly interactive manner.

摘要

统计参数映射 (SPM) 是神经影像学数据的多元分析的主要范例。最近,一种称为后验概率映射 (PPM) 的贝叶斯方法被提出作为替代方法。PPM 提供了两个优势:(i) 可以对效应大小进行推断,从而为激活区域赋予精确的生理意义,(ii) 可以宣布区域不活跃。这种后者的便利功能最简洁地由基于贝叶斯模型比较的 PPM 提供。迄今为止,这些比较是通过独立模型优化 (IMO) 程序来实现的,该程序分别拟合零假设和替代模型。本文提出了一种更有效的计算方法,该方法基于贝叶斯因子的 Savage-Dickey 逼近,以及体素级后验协方差矩阵的泰勒级数逼近。模拟结果表明,这种 Savage-Dickey-Taylor (SDT) 方法的准确性与 IMO 相当。在 fMRI 数据上的结果表明,SDT 和 IMO 在二级模型上具有极好的一致性,在一级模型上也具有合理的一致性。这种 Savage-Dickey 检验是经典 SPM-F 的贝叶斯模拟,允许用户以真正的交互方式实现模型比较。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f792/3606143/694043415a9e/pone.0059655.g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f792/3606143/25f366a51d43/pone.0059655.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f792/3606143/c013ac1233cd/pone.0059655.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f792/3606143/3eedd04eb947/pone.0059655.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f792/3606143/68f6b2f09433/pone.0059655.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f792/3606143/79785efa40dc/pone.0059655.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f792/3606143/af8d5f501f97/pone.0059655.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f792/3606143/b689b5e452a9/pone.0059655.g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f792/3606143/694043415a9e/pone.0059655.g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f792/3606143/25f366a51d43/pone.0059655.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f792/3606143/c013ac1233cd/pone.0059655.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f792/3606143/3eedd04eb947/pone.0059655.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f792/3606143/68f6b2f09433/pone.0059655.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f792/3606143/79785efa40dc/pone.0059655.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f792/3606143/af8d5f501f97/pone.0059655.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f792/3606143/b689b5e452a9/pone.0059655.g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f792/3606143/694043415a9e/pone.0059655.g008.jpg

相似文献

1
Efficient posterior probability mapping using Savage-Dickey ratios.利用 Savage-Dickey 比率进行有效的后验概率映射。
PLoS One. 2013;8(3):e59655. doi: 10.1371/journal.pone.0059655. Epub 2013 Mar 22.
2
A caveat on the Savage-Dickey density ratio: The case of computing Bayes factors for regression parameters.萨维奇-迪基密度比的注意事项:用于回归参数贝叶斯因子计算的案例。
Br J Math Stat Psychol. 2019 May;72(2):316-333. doi: 10.1111/bmsp.12150. Epub 2018 Nov 19.
3
Time series analysis of fMRI data: Spatial modelling and Bayesian computation.功能磁共振成像数据的时间序列分析:空间建模与贝叶斯计算。
Stat Med. 2018 Aug 15;37(18):2753-2770. doi: 10.1002/sim.7680. Epub 2018 May 2.
4
Posterior probability maps and SPMs.后验概率图和统计参数映射图。
Neuroimage. 2003 Jul;19(3):1240-9. doi: 10.1016/s1053-8119(03)00144-7.
5
Classical and Bayesian inference in neuroimaging: applications.神经影像学中的经典推理与贝叶斯推理:应用
Neuroimage. 2002 Jun;16(2):484-512. doi: 10.1006/nimg.2002.1091.
6
Bayesian hypothesis testing for psychologists: a tutorial on the Savage-Dickey method.贝叶斯假设检验对心理学家来说:萨维奇-迪基方法教程。
Cogn Psychol. 2010 May;60(3):158-89. doi: 10.1016/j.cogpsych.2009.12.001. Epub 2010 Jan 12.
7
Post-hoc selection of dynamic causal models.事后选择动态因果模型。
J Neurosci Methods. 2012 Jun 30;208(1):66-78. doi: 10.1016/j.jneumeth.2012.04.013. Epub 2012 May 4.
8
Bayesian model selection maps for group studies.贝叶斯模型选择图在组研究中的应用。
Neuroimage. 2010 Jan 1;49(1):217-24. doi: 10.1016/j.neuroimage.2009.08.051. Epub 2009 Sep 2.
9
Bayesian fMRI time series analysis with spatial priors.具有空间先验的贝叶斯功能磁共振成像时间序列分析
Neuroimage. 2005 Jan 15;24(2):350-62. doi: 10.1016/j.neuroimage.2004.08.034.
10
A Bayesian goodness of fit test and semiparametric generalization of logistic regression with measurement data.一种用于测量数据的贝叶斯拟合优度检验及逻辑回归的半参数推广。
Biometrics. 2013 Jun;69(2):508-19. doi: 10.1111/biom.12007. Epub 2013 Mar 14.

引用本文的文献

1
Evidence for non-selective response inhibition in uncertain contexts revealed by combined meta-analysis and Bayesian analysis of fMRI data.联合 fMRI 数据的元分析和贝叶斯分析揭示不确定情境下非选择性反应抑制的证据。
Sci Rep. 2022 Jun 16;12(1):10137. doi: 10.1038/s41598-022-14221-x.
2
Suppression of non-selected solutions as a possible brain mechanism for ambiguity resolution in the word fragment task completion task.抑制非选择解可能是完成单词片段任务中歧义解析的大脑机制。
Sci Rep. 2022 Feb 3;12(1):1829. doi: 10.1038/s41598-022-05646-5.
3
Providing Evidence for the Null Hypothesis in Functional Magnetic Resonance Imaging Using Group-Level Bayesian Inference.

本文引用的文献

1
Bayesian Versus Orthodox Statistics: Which Side Are You On?贝叶斯统计与经典统计:你站在哪一边?
Perspect Psychol Sci. 2011 May;6(3):274-90. doi: 10.1177/1745691611406920.
2
Post-hoc selection of dynamic causal models.事后选择动态因果模型。
J Neurosci Methods. 2012 Jun 30;208(1):66-78. doi: 10.1016/j.jneumeth.2012.04.013. Epub 2012 May 4.
3
Effective Connectivity Modeling for fMRI: Six Issues and Possible Solutions Using Linear Dynamic Systems.功能磁共振成像的有效连接建模:使用线性动态系统的六个问题及可能的解决方案。
使用组水平贝叶斯推理为功能磁共振成像中的零假设提供证据。
Front Neuroinform. 2021 Dec 2;15:738342. doi: 10.3389/fninf.2021.738342. eCollection 2021.
4
Bayesian Model Selection Maps for Group Studies Using M/EEG Data.用于使用脑磁图/脑电图数据进行群体研究的贝叶斯模型选择图。
Front Neurosci. 2018 Sep 28;12:598. doi: 10.3389/fnins.2018.00598. eCollection 2018.
5
Improved estimates for the role of grey matter volume and GABA in bistable perception.对灰质体积和γ-氨基丁酸在双稳态感知中作用的改进估计。
Cortex. 2016 Oct;83:292-305. doi: 10.1016/j.cortex.2016.08.006. Epub 2016 Aug 26.
6
Estimating anatomical trajectories with Bayesian mixed-effects modeling.使用贝叶斯混合效应模型估计解剖轨迹。
Neuroimage. 2015 Nov 1;121:51-68. doi: 10.1016/j.neuroimage.2015.06.094. Epub 2015 Jul 17.
7
Objective Bayesian fMRI analysis-a pilot study in different clinical environments.客观贝叶斯功能磁共振成像分析——在不同临床环境中的一项初步研究。
Front Neurosci. 2015 May 12;9:168. doi: 10.3389/fnins.2015.00168. eCollection 2015.
8
Relative valuation of pain in human orbitofrontal cortex.人类眶额皮质中疼痛的相对评估
J Neurosci. 2014 Oct 29;34(44):14526-35. doi: 10.1523/JNEUROSCI.1706-14.2014.
9
Estimating neural response functions from fMRI.从 fMRI 估计神经响应函数。
Front Neuroinform. 2014 May 8;8:48. doi: 10.3389/fninf.2014.00048. eCollection 2014.
Front Syst Neurosci. 2012 Jan 18;5:104. doi: 10.3389/fnsys.2011.00104. eCollection 2011.
4
BSMac: a MATLAB toolbox implementing a Bayesian spatial model for brain activation and connectivity.BSMac:一个 MATLAB 工具箱,用于实现大脑激活和连通性的贝叶斯空间模型。
J Neurosci Methods. 2012 Feb 15;204(1):133-143. doi: 10.1016/j.jneumeth.2011.10.025. Epub 2011 Nov 10.
5
Bayesian inference in FMRI.FMRI 中的贝叶斯推断。
Neuroimage. 2012 Aug 15;62(2):801-10. doi: 10.1016/j.neuroimage.2011.10.047. Epub 2011 Oct 20.
6
The problem of low variance voxels in statistical parametric mapping; a new hat avoids a 'haircut'.统计参数映射中低方差体素的问题;新帽子避免了“理发”。
Neuroimage. 2012 Feb 1;59(3):2131-41. doi: 10.1016/j.neuroimage.2011.10.027. Epub 2011 Oct 18.
7
Comparing dynamic causal models using AIC, BIC and free energy.使用 AIC、BIC 和自由能比较动态因果模型。
Neuroimage. 2012 Jan 2;59(1):319-30. doi: 10.1016/j.neuroimage.2011.07.039. Epub 2011 Jul 27.
8
Clinical amyloid imaging in Alzheimer's disease.阿尔茨海默病的临床淀粉样蛋白成像。
Lancet Neurol. 2011 Jul;10(7):667-70. doi: 10.1016/S1474-4422(11)70123-5.
9
Time scales of representation in the human brain: weighing past information to predict future events.人类大脑中的表征时间尺度:权衡过去信息以预测未来事件。
Front Hum Neurosci. 2011 Apr 26;5:37. doi: 10.3389/fnhum.2011.00037. eCollection 2011.
10
Effective connectivity: influence, causality and biophysical modeling.有效连接:影响、因果关系和生物物理建模。
Neuroimage. 2011 Sep 15;58(2):339-61. doi: 10.1016/j.neuroimage.2011.03.058. Epub 2011 Apr 6.