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Manta——一个用于 MATLAB 的开源、高密度电生理记录套件。

MANTA--an open-source, high density electrophysiology recording suite for MATLAB.

机构信息

Neural Systems Laboratory, Institute for Systems Research, University of Maryland College Park, MD, USA ; Equipe Audition, Département d'études cognitives, Ecole Normale Superieure Paris, France.

出版信息

Front Neural Circuits. 2013 May 6;7:69. doi: 10.3389/fncir.2013.00069. eCollection 2013.

Abstract

The distributed nature of nervous systems makes it necessary to record from a large number of sites in order to decipher the neural code, whether single cell, local field potential (LFP), micro-electrocorticograms (μECoG), electroencephalographic (EEG), magnetoencephalographic (MEG) or in vitro micro-electrode array (MEA) data are considered. High channel-count recordings also optimize the yield of a preparation and the efficiency of time invested by the researcher. Currently, data acquisition (DAQ) systems with high channel counts (>100) can be purchased from a limited number of companies at considerable prices. These systems are typically closed-source and thus prohibit custom extensions or improvements by end users. We have developed MANTA, an open-source MATLAB-based DAQ system, as an alternative to existing options. MANTA combines high channel counts (up to 1440 channels/PC), usage of analog or digital headstages, low per channel cost (<$90/channel), feature-rich display and filtering, a user-friendly interface, and a modular design permitting easy addition of new features. MANTA is licensed under the GPL and free of charge. The system has been tested by daily use in multiple setups for >1 year, recording reliably from 128 channels. It offers a growing list of features, including integrated spike sorting, PSTH and CSD display and fully customizable electrode array geometry (including 3D arrays), some of which are not available in commercial systems. MANTA runs on a typical PC and communicates via TCP/IP and can thus be easily integrated with existing stimulus generation/control systems in a lab at a fraction of the cost of commercial systems. With modern neuroscience developing rapidly, MANTA provides a flexible platform that can be rapidly adapted to the needs of new analyses and questions. Being open-source, the development of MANTA can outpace commercial solutions in functionality, while maintaining a low price-point.

摘要

神经系统的分布式特性使得有必要从大量的位点进行记录,以便破译神经代码,无论是单细胞、局部场电位 (LFP)、微脑电描记图 (μECoG)、脑电图 (EEG)、脑磁图 (MEG) 还是体外微电极阵列 (MEA) 数据。高通道计数记录还优化了准备工作的产量和研究人员投入的时间效率。目前,高通道计数 (>100) 的数据采集 (DAQ) 系统可以从少数几家公司以相当高的价格购买。这些系统通常是闭源的,因此禁止最终用户进行自定义扩展或改进。我们开发了 MANTA,这是一种基于 MATLAB 的开源 DAQ 系统,作为现有选项的替代方案。MANTA 结合了高通道计数(多达 1440 个通道/PC)、模拟或数字前置放大器头、低每通道成本(<$90/通道)、功能丰富的显示和滤波、用户友好的界面以及模块化设计,允许轻松添加新功能。MANTA 受 GPL 许可,免费使用。该系统已在多个设置中经过多年的日常使用测试,可从 128 个通道可靠地记录。它提供了一系列不断增长的功能,包括集成的尖峰排序、PSTH 和 CSD 显示以及完全可定制的电极阵列几何形状(包括 3D 阵列),其中一些在商业系统中不可用。MANTA 在典型的 PC 上运行,并通过 TCP/IP 进行通信,因此可以以商业系统成本的一小部分轻松集成到实验室现有的刺激生成/控制系统中。随着现代神经科学的快速发展,MANTA 提供了一个灵活的平台,可以快速适应新分析和问题的需求。作为开源的,MANTA 的开发可以在功能上超过商业解决方案,同时保持低价点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cf7c/3644699/11cf572f689a/fncir-07-00069-g0001.jpg

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