Department of Environmental Engineering, Zhejiang University, Hangzhou, China.
Appl Environ Microbiol. 2013 Oct;79(19):6167-72. doi: 10.1128/AEM.00884-13. Epub 2013 Jun 7.
Anaerobic ammonium-oxidizing (anammox) bacteria have been detected in many marine and freshwater ecosystems. However, little is known about the distribution, diversity, and abundance of anammox bacteria in terrestrial ecosystems. In this study, anammox bacteria were found to be present in various agricultural soils collected from 32 different locations in China. Phylogenetic analysis of the 16S rRNA genes showed "Candidatus Brocadia," "Candidatus Kuenenia," "Candidatus Anammoxoglobus," and "Candidatus Jettenia" in the collected soils, with "Candidatus Brocadia" being the dominant genus. Quantitative PCR showed that the abundance of anammox bacteria ranged from 6.38 × 10(4) ± 0.42 × 10(4) to 3.69 × 10(6) ± 0.25 × 10(6) copies per gram of dry weight. Different levels of diversity, composition, and abundance of the anammox bacterial communities were observed, and redundancy analysis indicated that the soil organic content and the distribution of anammox communities were correlated in the soils examined. Furthermore, Pearson correlation analysis showed that the diversity of the anammox bacteria was positively correlated with the soil ammonium content and the organic content, while the anammox bacterial abundance was positively correlated with the soil ammonium content. These results demonstrate the broad distribution of diverse anammox bacteria and its correlation with the soil environmental conditions within an extensive range of Chinese agricultural soils.
在许多海洋和淡水生态系统中都检测到了厌氧氨氧化(anammox)细菌。然而,对于陆地生态系统中 anammox 细菌的分布、多样性和丰度知之甚少。本研究发现,在中国 32 个不同地点采集的各种农业土壤中存在 anammox 细菌。16S rRNA 基因的系统发育分析表明,采集的土壤中存在“Candidatus Brocadia”、“Candidatus Kuenenia”、“Candidatus Anammoxoglobus”和“Candidatus Jettenia”,其中“Candidatus Brocadia”是优势属。定量 PCR 显示,anammox 细菌的丰度范围为 6.38×10(4)±0.42×10(4)至 3.69×10(6)±0.25×10(6)拷贝/克干重。观察到 anammox 细菌群落的多样性、组成和丰度存在不同水平,冗余分析表明,在所研究的土壤中,土壤有机含量和 anammox 群落的分布存在相关性。此外,Pearson 相关分析表明,anammox 细菌的多样性与土壤铵含量和有机含量呈正相关,而 anammox 细菌的丰度与土壤铵含量呈正相关。这些结果表明,广泛分布的多样 anammox 细菌与中国广大农业土壤中的土壤环境条件相关。