Faculty of Psychology and Educational Sciences, Department of Data Analysis, Ghent University, Ghent, Belgium ; Key Laboratory for NeuroInformation of Ministry of Education, School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu, China.
PLoS One. 2013 Sep 12;8(9):e73670. doi: 10.1371/journal.pone.0073670. eCollection 2013.
A network approach to brain and dynamics opens new perspectives towards understanding of its function. The functional connectivity from functional MRI recordings in humans is widely explored at large scale, and recently also at the voxel level. The networks of dynamical directed connections are far less investigated, in particular at the voxel level. To reconstruct full brain effective connectivity network and study its topological organization, we present a novel approach to multivariate Granger causality which integrates information theory and the architecture of the dynamical network to efficiently select a limited number of variables. The proposed method aggregates conditional information sets according to community organization, allowing to perform Granger causality analysis avoiding redundancy and overfitting even for high-dimensional and short datasets, such as time series from individual voxels in fMRI. We for the first time depicted the voxel-wise hubs of incoming and outgoing information, called Granger causality density (GCD), as a complement to previous repertoire of functional and anatomical connectomes. Analogies with these networks have been presented in most part of default mode network; while differences suggested differences in the specific measure of centrality. Our findings could open the way to a new description of global organization and information influence of brain function. With this approach is thus feasible to study the architecture of directed networks at the voxel level and individuating hubs by investigation of degree, betweenness and clustering coefficient.
一种用于大脑和动力学的网络方法为理解其功能开辟了新的视角。从人类的功能磁共振成像记录中广泛探索了功能连通性的大尺度,最近也在体素水平上进行了探索。动态有向连接网络远未得到充分研究,特别是在体素水平上。为了重建全脑有效连接网络并研究其拓扑结构,我们提出了一种新的多元格兰杰因果关系方法,该方法将信息论和动力学网络的结构结合起来,以有效地选择有限数量的变量。该方法根据社区组织聚合条件信息集,允许进行格兰杰因果分析,即使对于高维和短数据集(如 fMRI 中单个体素的时间序列),也可以避免冗余和过拟合。我们首次以传入和传出信息的体素为中心,称为格兰杰因果密度(GCD),作为功能和解剖连通组的补充。在默认模式网络的大部分区域都呈现了与这些网络的类比;而差异则表明特定中心度测量的差异。我们的发现可能为大脑功能的全局组织和信息影响提供新的描述方式。通过这种方法,在体素水平上研究有向网络的结构并通过研究度、介数和聚类系数来确定中心体成为可能。