Département de Biologie, PROTEO, Pavillon Charles-Eugène-Marchand, Institut de Biologie Intégrative et des Systèmes, Université Laval, Québec, QC, Canada.
FEMS Yeast Res. 2014 Mar;14(2):281-8. doi: 10.1111/1567-1364.12100. Epub 2013 Oct 25.
We examined the northern limit of Saccharomyces cerevisiae and Saccharomyces paradoxus in northeast America. We collected 876 natural samples at 29 sites and applied enrichment methods for the isolation of mesophilic yeasts. We uncovered a large diversity of yeasts, in some cases, associated with specific substrates. Sequencing of the ITS1, 5.8S and ITS2 loci allowed to assign 226 yeast strains at the species level, including 41 S. paradoxus strains. Our intensive sampling suggests that if present, S. cerevisiae is rare at these northern latitudes. Our sampling efforts spread across several months of the year revealed that successful sampling increases throughout the summer and diminishes significantly at the beginning of the fall. The data obtained on the ecological context of yeasts corroborate what was previously reported on Pichiaceae, Saccharomycodaceae, Debaryomycetaceae and Phaffomycetaceae yeast families. We identified 24 yeast isolates that could not be assigned to any known species and that may be of taxonomic, medical, or biotechnological importance. Our study reports new data on the taxonomic diversity of yeasts and new resources for studying the evolution and ecology of S. paradoxus.
我们考察了北美东北部的酿酒酵母和反常酿酒酵母的北部界限。我们在 29 个地点采集了 876 个自然样本,并采用了富集方法来分离中温酵母。我们发现了大量的酵母,在某些情况下,它们与特定的基质相关。通过对 ITS1、5.8S 和 ITS2 基因座的测序,我们能够将 226 株酵母菌株分配到种的水平,其中包括 41 株反常酿酒酵母菌株。我们的密集采样表明,如果存在的话,酿酒酵母在这些北纬地区也非常稀少。我们全年分几个月进行的采样工作表明,夏季采样成功率逐渐增加,秋季开始时显著下降。从酵母的生态背景中获得的数据证实了先前对毕赤酵母科、糖酵母科、德巴利酵母科和假丝酵母科酵母的报道。我们鉴定了 24 株无法归为任何已知种的酵母分离株,它们可能具有分类学、医学或生物技术方面的重要性。本研究报告了关于酵母分类多样性的新数据,以及研究反常酿酒酵母进化和生态学的新资源。