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长黄杆菌新种和尿囊酸杆菌新种,从废水处理厂中分离得到,以及对嘉氏黄杆菌和土壤黄杆菌描述的修正。

Flavobacterium longum sp. nov. and Flavobacterium urocaniciphilum sp. nov., isolated from a wastewater treatment plant, and emended descriptions of Flavobacterium caeni and Flavobacterium terrigena.

机构信息

Yakult Central Institute for Microbiological Research, 1796 Yaho, Kunitachi, 186-8650 Tokyo, Japan.

出版信息

Int J Syst Evol Microbiol. 2014 May;64(Pt 5):1488-1494. doi: 10.1099/ijs.0.054312-0. Epub 2014 Jan 22.

Abstract

Two Gram-staining-negative, strictly aerobic, non-endospore-forming, non-motile, rod-shaped bacteria, designated strains YIT 12745T and YIT 12746T, were isolated from sludge from a wastewater treatment plant. 16S rRNA gene sequence analyses indicated that these strains belonged to the genus Flavobacterium. In these analyses, strains YIT 12745T and YIT 12746T were most closely related to the type strains of Flavobacterium caeni and Flavobacterium terrigena, with 16S rRNA gene sequence similarity values of 94.9% and 96.2%, respectively. For both novel strains, menaquinone (MK-6) was the only respiratory quinone. The major fatty acids of strain YIT 12745T were iso-C15:1 G (14.4%), iso-C16:0 (13.2%), C15:0 (12.9%), iso-C15:0 (12.9%) and iso-C17:0 3-OH (11.5%). Those of strain YIT 12746T were iso-C15:0 (21.5%), iso-C16:0 (13.3%), C15:0 (12.0%) and iso-C15:1 G (11.9%). The genomic DNA G+C contents of strains YIT 12745T and YIT 12746T were 48.7 and 30.9 mol%, respectively. From their differential phenotypic and phylogenetic characteristics, these strains are considered to represent two novel species of the genus Flavobacterium, for which the names Flavobacterium longum sp. nov. (type strain YIT 12745T=JCM 19141T=DSM 27077T) and Flavobacterium urocaniciphilum sp. nov. (type strain YIT 12746T=JCM 19142T=DSM 27078T) are proposed. Emended descriptions of Flavobacterium caeni and Flavobacterium terrigena are also proposed.

摘要

两株革兰氏阴性、严格需氧、非芽孢形成、非运动、杆状细菌,分别命名为 YIT 12745T 和 YIT 12746T,从一家废水处理厂的污泥中分离得到。16S rRNA 基因序列分析表明,这些菌株属于黄杆菌属。在这些分析中,菌株 YIT 12745T 和 YIT 12746T 与黄杆菌属的模式种 Flavobacterium caeni 和 Flavobacterium terrigena 的 16S rRNA 基因序列相似性最高,分别为 94.9%和 96.2%。对于这两个新菌株,menaquinone (MK-6) 是唯一的呼吸醌。菌株 YIT 12745T 的主要脂肪酸为 iso-C15:1 G (14.4%)、iso-C16:0 (13.2%)、C15:0 (12.9%)、iso-C15:0 (12.9%) 和 iso-C17:0 3-OH (11.5%)。菌株 YIT 12746T 的主要脂肪酸为 iso-C15:0 (21.5%)、iso-C16:0 (13.3%)、C15:0 (12.0%) 和 iso-C15:1 G (11.9%)。菌株 YIT 12745T 和 YIT 12746T 的基因组 DNA G+C 含量分别为 48.7 和 30.9 mol%。根据它们在表型和系统发育上的差异,这些菌株被认为代表了黄杆菌属的两个新种,分别命名为长黄杆菌(Flavobacterium longum sp. nov.)(模式株 YIT 12745T=JCM 19141T=DSM 27077T)和尿殖道黄杆菌(Flavobacterium urocaniciphilum sp. nov.)(模式株 YIT 12746T=JCM 19142T=DSM 27078T)。还提出了对 Flavobacterium caeni 和 Flavobacterium terrigena 的修订描述。

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