Chen Lihong, Liu Bo, Yang Jian, Jin Qi
MOH Key Laboratory of Systems Biology of Pathogens, Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing, China.
Database (Oxford). 2014 Mar 18;2014:bau021. doi: 10.1093/database/bau021. Print 2014.
Emerging infectious diseases remain a significant threat to public health. Most emerging infectious disease agents in humans are of zoonotic origin. Bats are important reservoir hosts of many highly lethal zoonotic viruses and have been implicated in numerous emerging infectious disease events in recent years. It is essential to enhance our knowledge and understanding of the genetic diversity of the bat-associated viruses to prevent future outbreaks. To facilitate further research, we constructed the database of bat-associated viruses (DBatVir). Known viral sequences detected in bat samples were manually collected and curated, along with the related metadata, such as the sampling time, location, bat species and specimen type. Additional information concerning the bats, including common names, diet type, geographic distribution and phylogeny were integrated into the database to bridge the gap between virologists and zoologists. The database currently covers >4100 bat-associated animal viruses of 23 viral families detected from 196 bat species in 69 countries worldwide. It provides an overview and snapshot of the current research regarding bat-associated viruses, which is essential now that the field is rapidly expanding. With a user-friendly interface and integrated online bioinformatics tools, DBatVir provides a convenient and powerful platform for virologists and zoologists to analyze the virome diversity of bats, as well as for epidemiologists and public health researchers to monitor and track current and future bat-related infectious diseases. Database URL: http://www.mgc.ac.cn/DBatVir/.
新发传染病仍然是对公众健康的重大威胁。大多数人类新发传染病病原体源自动物。蝙蝠是许多高致死性动物源病毒的重要宿主,近年来与众多新发传染病事件有关。加强我们对蝙蝠相关病毒遗传多样性的认识和理解对于预防未来疫情爆发至关重要。为便于进一步研究,我们构建了蝙蝠相关病毒数据库(DBatVir)。人工收集并整理了在蝙蝠样本中检测到的已知病毒序列以及相关元数据,如采样时间、地点、蝙蝠种类和样本类型。有关蝙蝠的其他信息,包括俗名、食性类型、地理分布和系统发育,也被整合到数据库中,以弥合病毒学家和动物学家之间的差距。该数据库目前涵盖了全球69个国家196种蝙蝠中检测到的23个病毒科的4100多种蝙蝠相关动物病毒。它提供了关于蝙蝠相关病毒当前研究的概述和快照,鉴于该领域正在迅速扩展,这一点至关重要。凭借用户友好的界面和集成的在线生物信息学工具,DBatVir为病毒学家和动物学家分析蝙蝠病毒组多样性提供了一个便捷而强大的平台,也为流行病学家和公共卫生研究人员监测和追踪当前及未来与蝙蝠相关的传染病提供了平台。数据库网址:http://www.mgc.ac.cn/DBatVir/