Porreca Immacolata, D'Angelo Fulvio, Gentilcore Daniela, Carchia Emanuele, Amoresano Angela, Affuso Andrea, Ceccarelli Michele, De Luca Pasquale, Esposito Libera, Guadagno Francesco M, Mallardo Massimo, Nardone Antonio, Maccarone Sergio, Pane Francesca, Scarfò Marzia, Sordino Paolo, De Felice Mario, Ambrosino Concetta
IRGS, Biogem, Via Camporeale, 83031 Ariano Irpino, Avellino, Italy.
BMC Genomics. 2014 Dec 5;15(1):1067. doi: 10.1186/1471-2164-15-1067.
Comparison of toxicogenomic data facilitates the identification of deregulated gene patterns and maximizes health risk prediction in human.
Here, we performed phenotypic anchoring on the effects of acute exposure to low-grade polluted groundwater using mouse and zebrafish. Also, we evaluated two windows of chronic exposure in mouse, starting in utero and at the end of lactation. Bioinformatic analysis of livers microarray data showed that the number of deregulated biofunctions and pathways is higher after acute exposure, compared to the chronic one. It also revealed specific profiles of altered gene expression in all treatments, pointing to stress response/mitochondrial pathways as major players of environmental toxicity. Of note, dysfunction of steroid hormones was also predicted by bioinformatic analysis and verified in both models by traditional approaches, serum estrogens measurement and vitellogenin mRNA determination in mice and zebrafish, respectively.
In our report, phenotypic anchoring in two vertebrate model organisms highlights the toxicity of low-grade pollution, with varying susceptibility based on exposure window. The overlay of zebrafish and mice deregulated pathways, more than single genes, is useful in risk identification from chemicals implicated in the observed effects.
毒理基因组数据的比较有助于识别失调的基因模式,并最大限度地提高对人类健康风险的预测。
在这里,我们利用小鼠和斑马鱼对急性暴露于低污染地下水的影响进行了表型锚定。此外,我们评估了小鼠从子宫内开始以及在哺乳期结束时的两个慢性暴露窗口。对肝脏微阵列数据的生物信息学分析表明,与慢性暴露相比,急性暴露后失调的生物功能和通路数量更多。它还揭示了所有处理中基因表达改变的特定特征,表明应激反应/线粒体通路是环境毒性的主要参与者。值得注意的是,生物信息学分析还预测了类固醇激素功能障碍,并分别通过传统方法在两种模型中得到验证,即小鼠和斑马鱼中血清雌激素测量和卵黄蛋白原mRNA测定。
在我们的报告中,在两种脊椎动物模型生物中的表型锚定突出了低污染的毒性,根据暴露窗口的不同易感性也不同。斑马鱼和小鼠失调通路的叠加,而不仅仅是单个基因,有助于从与观察到的效应相关的化学物质中识别风险。