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新种白色类芽孢杆菌,从泥炭土中分离得到。

Paenibacillus alba nov., isolated from peat soil.

作者信息

Kim Hyun-Sook, Srinivasan Sathiyaraj, Lee Sang-Seob

机构信息

Department of Bioengineering, Kyonggi University, 94-6 Iui-dong Yeongtong-gu, Suwon, 443-760, Republic of Korea.

出版信息

Curr Microbiol. 2015 Jun;70(6):865-70. doi: 10.1007/s00284-015-0795-9. Epub 2015 Mar 21.

DOI:10.1007/s00284-015-0795-9
PMID:25794481
Abstract

A white-colored bacterial strain designated J20-6(T) was isolated from peat soil collected in Russia. Based on the 16S rRNA gene sequence similarities, the strain J20-6(T) belonged to the genus Paenibacillus, and the closest relatives were Paenibacillus frigoriresistens YIM 016(T) (98.2 %), Paenibacillus alginolyticus DSM 5050T(T) (97.9 %), Paenibacillus chondroitinus DSM 5051(T) (97.4 %), Paenibacillus pocheonensis Gsoil 1138(T) (96.9 %), and Paenibacillus pectinilyticus RCB-08(T) (96.6 %). Cells are gram-positive, motile, facultative aerobic, endospore forming, and rod shaped. The cell wall contains MK-7 as the predominant menaquinone and meso-diaminopimelic acid as the diagnostic diamino acid. The major fatty acid is anteiso-C15:0, and the major polar lipids are diphosphatidylglycerol and phosphatidyl-ethanolamine. The DNA G+C content of the strain J20-6(T) was 49.9 mol %. The phenotypic, chemotaxonomic, and phylogenetic data clearly suggest that the strain J20-6(T) belongs to the novel member of the genus Paenibacillus, for which the name Paenibacillus alba sp. nov., is proposed. The type strain is J20-6(T) (=KEMC 7302-005(T) = JCM 18165(T)).

摘要

从俄罗斯采集的泥炭土中分离出一株白色细菌菌株,命名为J20-6(T)。基于16S rRNA基因序列相似性,菌株J20-6(T)属于芽孢杆菌属,与其亲缘关系最近的是耐冷芽孢杆菌YIM 016(T)(98.2%)、解藻酸芽孢杆菌DSM 5050T(T)(97.9%)、软骨素芽孢杆菌DSM 5051(T)(97.4%)、抱川芽孢杆菌Gsoil 1138(T)(96.9%)和果胶分解芽孢杆菌RCB-08(T)(96.6%)。细胞革兰氏阳性,具运动性,兼性需氧,形成芽孢,呈杆状。细胞壁以MK-7作为主要甲基萘醌,以中-二氨基庚二酸作为特征性二氨基酸。主要脂肪酸为anteiso-C15:0,主要极性脂为双磷脂酰甘油和磷脂酰乙醇胺。菌株J20-6(T)的DNA G+C含量为49.9 mol%。表型、化学分类和系统发育数据清楚地表明,菌株J20-6(T)属于芽孢杆菌属的一个新成员,为此提出新名称白色芽孢杆菌(Paenibacillus alba sp. nov.)。模式菌株为J20-6(T)(=KEMC 7302-005(T) = JCM 18165(T))。

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本文引用的文献

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CONFIDENCE LIMITS ON PHYLOGENIES: AN APPROACH USING THE BOOTSTRAP.系统发育树的置信区间:一种使用自展法的方法。
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Paenibacillus selenitireducens sp. nov., a selenite-reducing bacterium isolated from a selenium mineral soil.新型硒酸盐还原菌,一种从硒矿土壤中分离得到的能够还原亚硒酸盐的细菌。
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Paenibacillus frigoriresistens sp. nov., a novel psychrotroph isolated from a peat bog in Heilongjiang, Northern China.
耐冷类芽孢杆菌新种,一种从中国北方黑龙江省泥炭沼泽中分离得到的新型耐寒菌。
Antonie Van Leeuwenhoek. 2012 Aug;102(2):297-305. doi: 10.1007/s10482-012-9738-7. Epub 2012 Apr 26.
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MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods.MEGA5:用于最大似然法、进化距离法和最大简约法的分子进化遗传学分析。
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Paenibacillus sputi sp. nov., isolated from the sputum of a patient with pulmonary disease.短稳杆菌新种,从肺部疾病患者的痰液中分离得到。
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Paenibacillus pocheonensis sp. nov., a facultative anaerobe isolated from soil of a ginseng field.短稳杆菌,一种从人参田土壤中分离得到的兼性厌氧菌。
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Paenibacillus hunanensis sp. nov., isolated from rice seeds.湖南芽胞杆菌(Paenibacillus hunanensis),从水稻种子中分离得到的新种。
Int J Syst Evol Microbiol. 2010 Jun;60(Pt 6):1266-1270. doi: 10.1099/ijs.0.012179-0. Epub 2009 Aug 10.
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Paenibacillus aestuarii sp. nov., isolated from an estuarine wetland.河口湿地来源的新种 Paenibacillus aestuarii。
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Paenibacillus pectinilyticus sp. nov., isolated from the gut of Diestrammena apicalis.新种解果胶类芽孢杆菌,从日本大锹肠道中分离得到。
Int J Syst Evol Microbiol. 2009 Jun;59(Pt 6):1342-7. doi: 10.1099/ijs.0.002261-0.
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Paenibacillus camelliae sp. nov., isolated from fermented leaves of Camellia sinensis.新种茶树芽孢杆菌,从茶树发酵叶中分离得到。
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