Bellan Steven E, Pulliam Juliet R C, Pearson Carl A B, Champredon David, Fox Spencer J, Skrip Laura, Galvani Alison P, Gambhir Manoj, Lopman Ben A, Porco Travis C, Meyers Lauren Ancel, Dushoff Jonathan
Center for Computational Biology and Bioinformatics, The University of Texas at Austin, Austin, TX, USA.
Department of Biology, University of Florida, Gainesville, FL, USA; Emerging Pathogens Institute, University of Florida, Gainesville, FL, USA.
Lancet Infect Dis. 2015 Jun;15(6):703-10. doi: 10.1016/S1473-3099(15)70139-8. Epub 2015 Apr 14.
Safe and effective vaccines could help to end the ongoing Ebola virus disease epidemic in parts of west Africa, and mitigate future outbreaks of the virus. We assess the statistical validity and power of randomised controlled trial (RCT) and stepped-wedge cluster trial (SWCT) designs in Sierra Leone, where the incidence of Ebola virus disease is spatiotemporally heterogeneous, and is decreasing rapidly.
We projected district-level Ebola virus disease incidence for the next 6 months, using a stochastic model fitted to data from Sierra Leone. We then simulated RCT and SWCT designs in trial populations comprising geographically distinct clusters at high risk, taking into account realistic logistical constraints, and both individual-level and cluster-level variations in risk. We assessed false-positive rates and power for parametric and non-parametric analyses of simulated trial data, across a range of vaccine efficacies and trial start dates.
For an SWCT, regional variation in Ebola virus disease incidence trends produced increased false-positive rates (up to 0·15 at α=0·05) under standard statistical models, but not when analysed by a permutation test, whereas analyses of RCTs remained statistically valid under all models. With the assumption of a 6-month trial starting on Feb 18, 2015, we estimate the power to detect a 90% effective vaccine to be between 49% and 89% for an RCT, and between 6% and 26% for an SWCT, depending on the Ebola virus disease incidence within the trial population. We estimate that a 1-month delay in trial initiation will reduce the power of the RCT by 20% and that of the SWCT by 49%.
Spatiotemporal variation in infection risk undermines the statistical power of the SWCT. This variation also undercuts the SWCT's expected ethical advantages over the RCT, because an RCT, but not an SWCT, can prioritise vaccination of high-risk clusters.
US National Institutes of Health, US National Science Foundation, and Canadian Institutes of Health Research.
安全有效的疫苗有助于结束西非部分地区持续的埃博拉病毒病疫情,并减轻该病毒未来的爆发。我们评估了在塞拉利昂进行的随机对照试验(RCT)和阶梯楔形整群试验(SWCT)设计的统计有效性和检验效能,在塞拉利昂,埃博拉病毒病的发病率在时空上具有异质性,且正在迅速下降。
我们使用一个根据塞拉利昂数据拟合的随机模型,预测了未来6个月的地区级埃博拉病毒病发病率。然后,我们在由地理上不同的高风险群组组成的试验人群中模拟RCT和SWCT设计,同时考虑实际的后勤限制以及个体层面和群组层面的风险差异。我们评估了模拟试验数据在一系列疫苗效力和试验开始日期下进行参数分析和非参数分析时的假阳性率和检验效能。
对于SWCT,在标准统计模型下,埃博拉病毒病发病率趋势的区域差异导致假阳性率增加(在α = 0·05时高达0·15),但通过置换检验分析时则不会,而RCT的分析在所有模型下仍具有统计有效性。假设试验于2015年2月18日开始,为期6个月,我们估计对于RCT,检测90%有效疫苗的检验效能在49%至89%之间,对于SWCT则在6%至26%之间,这取决于试验人群中的埃博拉病毒病发病率。我们估计试验开始延迟1个月将使RCT的检验效能降低20%,使SWCT的检验效能降低49%。
感染风险的时空变化削弱了SWCT的统计效能。这种变化也削弱了SWCT相对于RCT预期的伦理优势,因为RCT而非SWCT可以优先对高风险群组进行疫苗接种。
美国国立卫生研究院、美国国家科学基金会和加拿大卫生研究院。