Her Jihee, Lee Sang-Seob
Department of Life Science, Graduate School of Kyonggi University, 94-6 Iui-dong Yeongtong-gu, Suwon, 433-760, Republic of Korea.
Curr Microbiol. 2015 Aug;71(2):235-42. doi: 10.1007/s00284-015-0820-z. Epub 2015 Apr 29.
A novel bacterial strain, designated Re6(T), was isolated from forest soil collected in Campbell University, North Carolina. The cells are aerobic, Gram-positive, non-motile, and rod shaped. Growth occurred at 4-42 °C (optimum, 25 °C), pH 6-9 (optimum, pH 6), and in 0-3 % NaCl (w/v). Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain Re6(T) belonged to the genus Leucobacter and showed the highest 16S rRNA gene sequence similarities with Leucobacter iarius JCM 14736(T) (98.3 %), Leucobacter luti JCM 14920(T) (97.9 %), Leucobacter komagatae JCM 9414(T) (97.8 %), and Leucobacter denitrificans KACC 14055(T) (97.7 %). Strain Re6(T) contained anteiso-C15:0 (45.2 %), iso-C16:0 (17.1 %), and anteiso-C17:0 (32.6 %) as the major cellular fatty acids; MK-11 as the major respiratory quinone; L-diaminobutyric acid as the diagnostic diamine acid in cell wall peptidoglycan; and diphosphatidylglycerol and phosphatidylglycerol as the main polar lipids. The DNA G+C content of the strain Re6(T) was 66.6 mol%. DNA-DNA hybridization results showed similarity values less than 50 % for DNA samples from the most closely related type strains of L. iarius, L. luti, and L. komagatae. On the basis of the data from the polyphasic analysis, strain Re6(T) is considered to be a representative novel species in the genus Leucobacter, for which the name Leucobacter humi sp. nov. is proposed. The type strain is Re6(T) (KEMC 7301-006(T) = JCM 18638(T)).
从北卡罗来纳州坎贝尔大学采集的森林土壤中分离出一株新型细菌菌株,命名为Re6(T)。该菌为需氧菌,革兰氏阳性,无运动性,呈杆状。在4-42℃(最适温度25℃)、pH 6-9(最适pH 6)和0-3% NaCl(w/v)条件下生长。基于16S rRNA基因序列的系统发育分析表明,菌株Re6(T)属于勒克氏菌属,与伊氏勒克氏菌JCM 14736(T)(98.3%)、土色勒克氏菌JCM 14920(T)(97.9%)、科氏勒克氏菌JCM 9414(T)(97.8%)和反硝化勒克氏菌KACC 14055(T)(97.7%)的16S rRNA基因序列相似性最高。菌株Re6(T)的主要细胞脂肪酸为anteiso-C15:0(45.2%)、iso-C16:0(17.1%)和anteiso-C17:0(32.6%);主要呼吸醌为MK-11;细胞壁肽聚糖中的诊断性二胺酸为L-二氨基丁酸;主要极性脂为二磷脂酰甘油和磷脂酰甘油。菌株Re6(T)的DNA G+C含量为66.6 mol%。DNA-DNA杂交结果显示,与伊氏勒克氏菌、土色勒克氏菌和科氏勒克氏菌最密切相关的模式菌株的DNA样本相似性值低于50%。基于多相分析数据,菌株Re6(T)被认为是勒克氏菌属中的一个代表性新物种,为此提出新名称土生勒克氏菌(Leucobacter humi sp. nov.)。模式菌株为Re6(T)(KEMC 7301-006(T) = JCM 18638(T))。