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南极发草(禾本科)的分子细胞遗传学分析,南极海洋地区。

Molecular Cytogenetic Analysis of Deschampsia antarctica Desv. (Poaceae), Maritime Antarctic.

作者信息

Amosova Alexandra V, Bolsheva Nadezhda L, Samatadze Tatiana E, Twardovska Maryana O, Zoshchuk Svyatoslav A, Andreev Igor O, Badaeva Ekaterina D, Kunakh Viktor A, Muravenko Olga V

机构信息

Engelhardt Institute of Molecular Biology, Russian Academy of Sciences, Moscow, Russia.

Institute of Molecular Biology and Genetics, National Academy of Sciences of Ukraine, Kyiv, Ukraine.

出版信息

PLoS One. 2015 Sep 22;10(9):e0138878. doi: 10.1371/journal.pone.0138878. eCollection 2015.

Abstract

Deschampsia antarctica Desv. (Poaceae) (2n = 26) is one of the two vascular plants adapted to the harshest environment of the Antarctic. Although the species is a valuable model for study of environmental stress tolerance in plants, its karyotype is still poorly investigated. We firstly conducted a comprehensive molecular cytogenetic analysis of D. antarctica collected on four islands of the Maritime Antarctic. D. antarctica karyotypes were studied by Giemsa C- and DAPI/C-banding, Ag-NOR staining, multicolour fluorescence in situ hybridization with repeated DNA probes (pTa71, pTa794, telomere repeats, pSc119.2, pAs1) and the GAA simple sequence repeat probe. We also performed sequential rapid in situ hybridization with genomic DNA of D. caespitosa. Two chromosome pairs bearing transcriptionally active 45S rDNA loci and five pairs with 5S rDNA sites were detected. A weak intercalary site of telomere repeats was revealed on the largest chromosome in addition to telomere hybridization signals at terminal positions. This fact confirms indirectly the hypothesis that chromosome fusion might have been the cause of the unusual for cereals chromosome number in this species. Based on patterns of distribution of the examined molecular cytogenetic markers, all chromosomes in karyotypes were identified, and chromosome idiograms of D. antarctica were constructed. B chromosomes were found in most karyotypes of plants from Darboux Island. A mixoploid plant with mainly triploid cells bearing a Robertsonian rearrangement was detected among typical diploid specimens from Great Jalour Island. The karyotype variability found in D. antarctica is probably an expression of genome instability induced by environmental stress factors. The differences in C-banding patterns and in chromosome distribution of rDNA loci as well as homologous highly repeated DNA sequences detected between genomes of D. antarctica and its related species D. caespitosa indicate that genome reorganization involving coding and noncoding repeated DNA sequences had occurred during the divergence of these species.

摘要

南极发草(Deschampsia antarctica Desv.)(禾本科)(2n = 26)是适应南极最恶劣环境的两种维管植物之一。尽管该物种是研究植物环境胁迫耐受性的宝贵模型,但其核型仍研究不足。我们首先对从南极海洋区域四个岛屿采集的南极发草进行了全面的分子细胞遗传学分析。通过吉姆萨C带和DAPI/C带、银染核仁组织区(Ag-NOR)染色、用重复DNA探针(pTa71、pTa794、端粒重复序列、pSc119.2、pAs1)和GAA简单序列重复探针进行多色荧光原位杂交来研究南极发草的核型。我们还对丛生发草(D. caespitosa)的基因组DNA进行了连续快速原位杂交。检测到两对带有转录活性45S rDNA位点的染色体和五对带有5S rDNA位点的染色体。除了在末端位置的端粒杂交信号外,在最大的染色体上还发现了一个较弱的端粒重复序列居间位点。这一事实间接证实了染色体融合可能是该物种中谷类植物异常染色体数目的原因这一假说。根据所检测分子细胞遗传学标记的分布模式,鉴定了核型中的所有染色体,并构建了南极发草的染色体模式图。在达尔布克斯岛植物的大多数核型中发现了B染色体。在大贾卢尔岛典型的二倍体标本中检测到一株主要为三倍体细胞且带有罗伯逊重排的混倍体植物。南极发草中发现的核型变异可能是环境胁迫因素诱导的基因组不稳定性的一种表现。南极发草及其近缘物种丛生发草基因组之间在C带模式、rDNA位点的染色体分布以及同源高度重复DNA序列方面的差异表明,在这些物种分化过程中发生了涉及编码和非编码重复DNA序列的基因组重组。

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