Park Sooyeon, Kim Sona, Kang Chul-Hyung, Jung Yong-Taek, Yoon Jung-Hoon
Department of Food Science and Biotechnology, Sungkyunkwan University, Jangan-gu, Suwon, South Korea.
University of Science and Technology (UST), 113 Gwahak-ro, Yuseong-gu, Daejeon, South Korea.
Int J Syst Evol Microbiol. 2015 Dec;65(12):4873-4879. doi: 10.1099/ijsem.0.000659. Epub 2015 Oct 6.
A Gram-stain-negative, motile, aerobic and rod-shaped bacterium, designated HJM-18T, was isolated from the place where the ocean and a freshwater lake meet at Hwajinpo, South Korea, and subjected to a taxonomic study using a polyphasic approach. Strain HJM-18T grew optimally at 30 °C, at pH 7.0-8.0 and in the presence of 1.0-3.0 % (w/v) NaCl. Phylogenetic trees based on 16S rRNA gene sequences showed that strain HJM-18T belonged to the genus Marinobacter. Strain HJM-18T exhibited 16S rRNA gene sequence similarity values of 97.05-98.22 % to the type strains of Marinobacter algicola, Marinobacter flavimaris, Marinobacter adhaerens, Marinobacter salarius, Marinobacter salsuginis, Marinobacter guineae and Marinobacter gudaonensis and of 93.21-96.98 % to the type strains of the other species of the genus Marinobacter. Strain HJM-18T contained Q-9 as the predominant ubiquinone and summed feature 3 (C16 : 1ω7c and/or C16 : 1ω6c), C16 : 0 and C18 : 1ω9c as the major fatty acids. The major polar lipids detected in strain HJM-18T were phosphatidylethanolamine, phosphatidylglycerol and one unidentified aminophospholipid. The DNA G+C content was 58 mol% and the mean DNA-DNA relatedness values with the type strains of the seven phylogenetically related species of the genus Marinobacter were 10-27 %. Differential phenotypic properties, together with phylogenetic and genetic distinctiveness, revealed that strain HJM-18T is separated from recognized species of the genus Marinobacter. On the basis of the data presented, strain HJM-18T represents a novel species of the genus Marinobacter, for which the name Marinobacter confluentis sp. nov. is proposed. The type strain is HJM-18T ( = KCTC 42705T = NBRC 111223T).
从韩国花津浦海洋与淡水湖交汇处分离出一株革兰氏阴性、具运动性、需氧的杆状细菌,命名为HJM-18T,并采用多相分类方法对其进行分类学研究。菌株HJM-18T在30 °C、pH 7.0 - 8.0以及1.0 - 3.0 %(w/v)NaCl存在的条件下生长最佳。基于16S rRNA基因序列构建的系统发育树表明,菌株HJM-18T属于海杆菌属。菌株HJM-18T与海栖海杆菌、黄色海杆菌、附着海杆菌、盐渍海杆菌、盐渍海栖菌、几内亚海杆菌和古岛海杆菌模式菌株的16S rRNA基因序列相似性值为97.05 - 98.22 %,与海杆菌属其他物种模式菌株的相似性值为93.21 - 96.98 %。菌株HJM-18T以Q-9作为主要泛醌,以特征性总和3(C16 : 1ω7c和/或C16 : 1ω6c)、C16 : 0和C18 : 1ω9c作为主要脂肪酸。在菌株HJM-18T中检测到的主要极性脂为磷脂酰乙醇胺、磷脂酰甘油和一种未鉴定的氨基磷脂。DNA G+C含量为58 mol%,与海杆菌属七个系统发育相关物种模式菌株的平均DNA - DNA相关性值为10 - 27 %。不同的表型特征,以及系统发育和遗传独特性,表明菌株HJM-18T与海杆菌属已确认的物种不同。基于所提供的数据,菌株HJM-18T代表海杆菌属的一个新物种,为此提出名为融合海杆菌(Marinobacter confluentis sp. nov.)。模式菌株为HJM-18T( = KCTC 42705T = NBRC 111223T)。