Svenningsen Nanna B, Pérez-Pantoja Danilo, Nikel Pablo I, Nicolaisen Mette H, de Lorenzo Víctor, Nybroe Ole
Department of Plant and Environmental Sciences, Section of Genetics and Microbiology, University of Copenhagen, Thorvaldsensvej 40, 1871, Frederiksberg C, Denmark.
Systems and Synthetic Biology Program, Centro Nacional de Biotecnología (CNB-CSIC), C/ Darwin 3, 28049, Madrid, Spain.
BMC Microbiol. 2015 Oct 6;15:202. doi: 10.1186/s12866-015-0542-1.
Soil bacteria typically thrive in water-limited habitats that cause an inherent matric stress to the cognate cells. Matric stress gives rise to accumulation of intracellular reactive oxygen species (ROS), which in turn may induce oxidative stress, and even promote mutagenesis. However, little is known about the impact of ROS induced by water limitation on bacteria performing important processes as pollutant biodegradation in the environment. We have rigorously examined the physiological consequences of the rise of intracellular ROS caused by matric stress for the toluene- and xylene-degrading soil bacterium Pseudomonas putida mt-2.
For the current experiments, controlled matric potential stress was delivered to P. putida cells by addition of polyethylene glycol to liquid cultures, and ROS formation in individual cells monitored by a specific dye. The physiological response to ROS was then quantified by both RT-qPCR of RNA transcripts from genes accredited as proxies of oxidative stress and the SOS response along with cognate transcriptional GFP fusions to the promoters of the same genes.
Extensive matric stress at -1.5 MPa clearly increased intracellular accumulation of ROS. The expression of the two major oxidative defense genes katA and ahpC, as well as the hydroperoxide resistance gene osmC, was induced under matric stress. Different induction profiles of the reporters were related to the severity of the stress. To determine if matric stress lead to induction of the SOS-response, we constructed a DNA damage-inducible bioreporter based on the LexA-controlled phage promoter PPP3901. According to bioreporter analysis, this gene was expressed during extensive matric stress. Despite this DNA-damage mediated gene induction, we observed no increase in the mutation frequency as monitored by emergence of rifampicin-resistant colonies.
Under conditions of extensive matric stress, we observed a direct link between matric stress, ROS formation, induction of ROS-detoxifying functions and (partial) activation of the SOS system. However, such a stress-response regime did not translate into a general DNA mutagenesis status. Taken together, the data suggest that P. putida mt-2 can cope with this archetypal environmental stress while preserving genome stability, a quality that strengthens the status of this bacterium for biotechnological purposes.
土壤细菌通常在水分有限的栖息地中茁壮成长,这种环境会给相关细胞带来内在的基质胁迫。基质胁迫会导致细胞内活性氧(ROS)的积累,进而可能引发氧化应激,甚至促进诱变。然而,关于水分限制诱导的ROS对在环境中执行重要过程(如污染物生物降解)的细菌的影响,我们知之甚少。我们已经严格研究了基质胁迫导致细胞内ROS升高对甲苯和二甲苯降解土壤细菌恶臭假单胞菌mt-2的生理影响。
在当前实验中,通过向液体培养物中添加聚乙二醇,将可控的基质势胁迫施加于恶臭假单胞菌细胞,并使用特定染料监测单个细胞中的ROS形成。然后,通过对被认可为氧化应激和SOS反应代理基因的RNA转录本进行RT-qPCR以及与相同基因启动子的同源转录绿色荧光蛋白融合,来量化对ROS的生理反应。
-1.5 MPa的广泛基质胁迫明显增加了细胞内ROS的积累。在基质胁迫下,两种主要的氧化防御基因katA和ahpC以及过氧化氢抗性基因osmC的表达被诱导。报告基因的不同诱导模式与胁迫的严重程度有关。为了确定基质胁迫是否导致SOS反应的诱导,我们构建了一个基于LexA控制的噬菌体启动子PPP3901的DNA损伤诱导生物报告基因。根据生物报告基因分析,该基因在广泛的基质胁迫下表达。尽管有这种DNA损伤介导的基因诱导,但通过耐利福平菌落的出现监测,我们未观察到突变频率增加。
在广泛的基质胁迫条件下,我们观察到基质胁迫、ROS形成、ROS解毒功能的诱导和SOS系统的(部分)激活之间存在直接联系。然而,这种应激反应机制并未转化为普遍的DNA诱变状态。综上所述,数据表明恶臭假单胞菌mt-2可以在保持基因组稳定性的同时应对这种典型的环境胁迫,这一特性增强了该细菌在生物技术方面的地位。