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海生明胶嗜菌属,新属,新种,一种源自微藻皮状微型绿球藻122培养液的细菌,以及黄东菌属的修订描述

Gelatiniphilus marinus gen. nov., sp. nov., a bacterium from the culture broth of a microalga, Picochlorum sp. 122, and emended description of the genus Hwangdonia.

作者信息

Tang Mingxing, Tan Li, Wu Hualian, Dai Shikun, Li Tao, Chen Chenghao, Li Jiaying, Fan Jiewei, Xiang Wenzhou, Li Xiang, Wang Guanghua

机构信息

Key Laboratory of Tropical Marine Bio-resources and Ecology (LMB), Guangdong Key Laboratory of Marine Materia Medica (LMMM-GD), South China Sea Institute of Oceanology, Chinese Academy of Sciences, Guangzhou 510301, PR China.

University of Chinese Academy of Sciences, Beijing 100049, PR China.

出版信息

Int J Syst Evol Microbiol. 2016 Aug;66(8):2893-2898. doi: 10.1099/ijsem.0.001074. Epub 2016 Apr 11.

Abstract

A Gram-stain-negative, non-motile, non-spore-forming, rod-shaped bacterium, designated strain GYP-24T, was isolated from the culture broth of a marine microalga, Picochlorum sp. 122. Phylogenetic analyses based on 16S rRNA gene sequences indicated that strain GYP-24T forms a robust cluster with H.wangdoniaseohaensis KCTC 32177T (95.8 % sequence similarity) in the family Flavobacteriaceae. Growth of strain GYP-24T was observed at 15, 22, 28, 30, 33 and 37 °C (optimal 30-33 °C), pH 6.0-10.0 (optimal pH 7.0-8.0) and in the presence of 0.5-4 % (w/v) NaCl (optimal 2-3 %). The only menaquinone of strain GYP-24T was MK-6, and the G+C content of the genomic DNA was 36.9 mol%. The major fatty acid profile comprised iso-C17 : 0 3-OH, summed feature 3 (C16 : 1 ω7c/ω6c), iso-C15 : 1 G and iso-C15 : 0. The major polar lipids of strain GYP-24T were phosphatidylethanolamine, one unidentified phospholipid, three unidentified aminolipids and three unidentified lipids. Comprehensive analyses based on polyphasic characterization of GYP-24T indicated that it represents a novel species of a new genus, for which the name Gelatiniphilus marinus gen. nov., sp. nov. is proposed. The type strain is GYP-24T (=KCTC 42903T=MCCC 1K01730T). An emended description of the genus Hwangdonia is also given.

摘要

从海洋微藻皮果藻属(Picochlorum sp. 122)的培养液中分离出一株革兰氏染色阴性、无运动性、不形成芽孢的杆状细菌,命名为菌株GYP-24T。基于16S rRNA基因序列的系统发育分析表明,菌株GYP-24T与黄东尼亚海栖菌(Hwangdonia seohaensis)KCTC 32177T在黄杆菌科中形成一个稳定的聚类群(序列相似性为95.8%)。在15、22、28、30、33和37 °C(最适温度30 - 33 °C)、pH 6.0 - 10.0(最适pH 7.0 - 8.0)以及0.5 - 4%(w/v)NaCl(最适浓度2 - 3%)的条件下观察到菌株GYP-24T的生长。菌株GYP-24T唯一的甲基萘醌是MK-6,基因组DNA的G+C含量为36.9 mol%。主要脂肪酸谱包括异-C17 : 0 3-OH、特征性总和3(C16 : 1 ω7c/ω6c)、异-C15 : 1 G和异-C15 : 0。菌株GYP-24T的主要极性脂质为磷脂酰乙醇胺、一种未鉴定的磷脂、三种未鉴定的氨基脂质和三种未鉴定的脂质。基于对GYP-24T的多相特征综合分析表明,它代表了一个新属的新物种,为此提出新属名海洋嗜明胶菌属(Gelatiniphilus marinus),新种名海洋嗜明胶菌(Gelatiniphilus marinus)。模式菌株为GYP-24T(=KCTC 42903T = MCCC 1K01730T)。同时还给出了黄东尼亚属(Hwangdonia)的修订描述。

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