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从污垢到工业应用:恶臭假单胞菌作为用于承载苛刻生化反应的合成生物学底盘。

From dirt to industrial applications: Pseudomonas putida as a Synthetic Biology chassis for hosting harsh biochemical reactions.

作者信息

Nikel Pablo I, Chavarría Max, Danchin Antoine, de Lorenzo Víctor

机构信息

Systems and Synthetic Biology Program, Centro Nacional de Biotecnología (CNB-CSIC), 28049 Madrid, Spain.

Escuela de Química & CIPRONA, Universidad de Costa Rica, 11501-2060 San José, Costa Rica.

出版信息

Curr Opin Chem Biol. 2016 Oct;34:20-29. doi: 10.1016/j.cbpa.2016.05.011. Epub 2016 May 27.

Abstract

The soil bacterium Pseudomonas putida is endowed with a central carbon metabolic network capable of fulfilling high demands of reducing power. This situation arises from a unique metabolic architecture that encompasses the partial recycling of triose phosphates to hexose phosphates-the so-called EDEMP cycle. In this article, the value of P. putida as a bacterial chassis of choice for contemporary, industrially-oriented metabolic engineering is addressed. The biochemical properties that make this bacterium adequate for hosting biotransformations involving redox reactions as well as toxic compounds and intermediates are discussed. Finally, novel developments and open questions in the continuous quest for an optimal microbial cell factory are presented at the light of current and future needs in the area of biocatalysis.

摘要

土壤细菌恶臭假单胞菌拥有一个能够满足对还原力高需求的中心碳代谢网络。这种情况源于一种独特的代谢架构,该架构包含磷酸丙糖向磷酸己糖的部分循环——即所谓的EDEMP循环。在本文中,探讨了恶臭假单胞菌作为当代面向工业的代谢工程首选细菌底盘的价值。讨论了使这种细菌适合进行涉及氧化还原反应以及有毒化合物和中间体的生物转化的生化特性。最后,根据生物催化领域当前和未来的需求,介绍了在持续寻求最佳微生物细胞工厂过程中的新进展和未解决的问题。

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