Terpolilli Jason J, Masakapalli Shyam K, Karunakaran Ramakrishnan, Webb Isabel U C, Green Rob, Watmough Nicholas J, Kruger Nicholas J, Ratcliffe R George, Poole Philip S
Centre for Rhizobium Studies, Murdoch University, Perth, Australia Department of Molecular Microbiology, John Innes Centre, Norwich, United Kingdom.
Department of Plant Sciences, University of Oxford, Oxford, United Kingdom.
J Bacteriol. 2016 Sep 22;198(20):2864-75. doi: 10.1128/JB.00451-16. Print 2016 Oct 15.
Within legume root nodules, rhizobia differentiate into bacteroids that oxidize host-derived dicarboxylic acids, which is assumed to occur via the tricarboxylic acid (TCA) cycle to generate NAD(P)H for reduction of N2 Metabolic flux analysis of laboratory-grown Rhizobium leguminosarum showed that the flux from [(13)C]succinate was consistent with respiration of an obligate aerobe growing on a TCA cycle intermediate as the sole carbon source. However, the instability of fragile pea bacteroids prevented their steady-state labeling under N2-fixing conditions. Therefore, comparative metabolomic profiling was used to compare free-living R. leguminosarum with pea bacteroids. While the TCA cycle was shown to be essential for maximal rates of N2 fixation, levels of pyruvate (5.5-fold reduced), acetyl coenzyme A (acetyl-CoA; 50-fold reduced), free coenzyme A (33-fold reduced), and citrate (4.5-fold reduced) were much lower in bacteroids. Instead of completely oxidizing acetyl-CoA, pea bacteroids channel it into both lipid and the lipid-like polymer poly-β-hydroxybutyrate (PHB), the latter via a type III PHB synthase that is active only in bacteroids. Lipogenesis may be a fundamental requirement of the redox poise of electron donation to N2 in all legume nodules. Direct reduction by NAD(P)H of the likely electron donors for nitrogenase, such as ferredoxin, is inconsistent with their redox potentials. Instead, bacteroids must balance the production of NAD(P)H from oxidation of acetyl-CoA in the TCA cycle with its storage in PHB and lipids.
Biological nitrogen fixation by symbiotic bacteria (rhizobia) in legume root nodules is an energy-expensive process. Within legume root nodules, rhizobia differentiate into bacteroids that oxidize host-derived dicarboxylic acids, which is assumed to occur via the TCA cycle to generate NAD(P)H for reduction of N2 However, direct reduction of the likely electron donors for nitrogenase, such as ferredoxin, is inconsistent with their redox potentials. Instead, bacteroids must balance oxidation of plant-derived dicarboxylates in the TCA cycle with lipid synthesis. Pea bacteroids channel acetyl-CoA into both lipid and the lipid-like polymer poly-β-hydroxybutyrate, the latter via a type II PHB synthase. Lipogenesis is likely to be a fundamental requirement of the redox poise of electron donation to N2 in all legume nodules.
在豆科植物根瘤内,根瘤菌分化为类菌体,这些类菌体氧化宿主衍生的二羧酸,据推测这是通过三羧酸(TCA)循环发生的,以生成用于还原N2的NAD(P)H。对实验室培养的豌豆根瘤菌进行的代谢通量分析表明,来自[(13)C]琥珀酸的通量与以TCA循环中间产物作为唯一碳源生长的专性需氧菌的呼吸作用一致。然而,脆弱的豌豆类菌体的不稳定性阻碍了它们在固氮条件下的稳态标记。因此,采用比较代谢组学分析来比较自由生活的豌豆根瘤菌和豌豆类菌体。虽然TCA循环被证明对最大固氮速率至关重要,但类菌体中丙酮酸(降低了5.5倍)、乙酰辅酶A(乙酰-CoA;降低了50倍)、游离辅酶A(降低了33倍)和柠檬酸(降低了4.5倍)的水平要低得多。豌豆类菌体不是完全氧化乙酰-CoA,而是将其导入脂质和类脂质聚合物聚-β-羟基丁酸酯(PHB)中,后者通过仅在类菌体中具有活性的III型PHB合酶实现。脂肪生成可能是所有豆科植物根瘤中向N2供电子的氧化还原平衡的基本要求。通过NAD(P)H直接还原诸如铁氧化还原蛋白等可能的固氮酶电子供体,与其氧化还原电位不一致。相反,类菌体必须平衡TCA循环中乙酰-CoA氧化产生的NAD(P)H的生成与其在PHB和脂质中的储存。
豆科植物根瘤中的共生细菌(根瘤菌)进行的生物固氮是一个耗能过程。在豆科植物根瘤内,根瘤菌分化为类菌体,这些类菌体氧化宿主衍生的二羧酸,据推测这是通过TCA循环发生的,以生成用于还原N2的NAD(P)H。然而,通过NAD(P)H直接还原诸如铁氧化还原蛋白等可能的固氮酶电子供体,与其氧化还原电位不一致。相反,类菌体必须平衡TCA循环中植物衍生二羧酸的氧化与脂质合成。豌豆类菌体将乙酰-CoA导入脂质和类脂质聚合物聚-β-羟基丁酸酯中,后者通过II型PHB合酶实现。脂肪生成可能是所有豆科植物根瘤中向N2供电子的氧化还原平衡的基本要求。