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FMRI Clustering in AFNI: False-Positive Rates Redux.

作者信息

Cox Robert W, Chen Gang, Glen Daniel R, Reynolds Richard C, Taylor Paul A

机构信息

Scientific and Statistical Computing Core, NIMH/NIH/DHHS , Bethesda, Maryland.

出版信息

Brain Connect. 2017 Apr;7(3):152-171. doi: 10.1089/brain.2016.0475.


DOI:10.1089/brain.2016.0475
PMID:28398812
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5399747/
Abstract

Recent reports of inflated false-positive rates (FPRs) in FMRI group analysis tools by Eklund and associates in 2016 have become a large topic within (and outside) neuroimaging. They concluded that existing parametric methods for determining statistically significant clusters had greatly inflated FPRs ("up to 70%," mainly due to the faulty assumption that the noise spatial autocorrelation function is Gaussian shaped and stationary), calling into question potentially "countless" previous results; in contrast, nonparametric methods, such as their approach, accurately reflected nominal 5% FPRs. They also stated that AFNI showed "particularly high" FPRs compared to other software, largely due to a bug in 3dClustSim. We comment on these points using their own results and figures and by repeating some of their simulations. Briefly, while parametric methods show some FPR inflation in those tests (and assumptions of Gaussian-shaped spatial smoothness also appear to be generally incorrect), their emphasis on reporting the single worst result from thousands of simulation cases greatly exaggerated the scale of the problem. Importantly, FPR statistics depends on "task" paradigm and voxelwise p value threshold; as such, we show how results of their study provide useful suggestions for FMRI study design and analysis, rather than simply a catastrophic downgrading of the field's earlier results. Regarding AFNI (which we maintain), 3dClustSim's bug effect was greatly overstated-their own results show that AFNI results were not "particularly" worse than others. We describe further updates in AFNI for characterizing spatial smoothness more appropriately (greatly reducing FPRs, although some remain >5%); in addition, we outline two newly implemented permutation/randomization-based approaches producing FPRs clustered much more tightly about 5% for voxelwise p ≤ 0.01.

摘要

相似文献

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[2]
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本文引用的文献

[1]
Analysis of family-wise error rates in statistical parametric mapping using random field theory.

Hum Brain Mapp. 2017-11-1

[2]
Impacting the effect of fMRI noise through hardware and acquisition choices - Implications for controlling false positive rates.

Neuroimage. 2017-7-1

[3]
Is the statistic value all we should care about in neuroimaging?

Neuroimage. 2017-2-15

[4]
Cluster failure: Why fMRI inferences for spatial extent have inflated false-positive rates.

Proc Natl Acad Sci U S A. 2016-7-12

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Linear mixed-effects modeling approach to FMRI group analysis.

Neuroimage. 2013-1-30

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Hum Brain Mapp. 1996

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Proc Natl Acad Sci U S A. 2010-2-22

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Soc Cogn Affect Neurosci. 2009-12-24

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