• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

转录-翻译表达体的结构

Architecture of a transcribing-translating expressome.

作者信息

Kohler R, Mooney R A, Mills D J, Landick R, Cramer P

机构信息

Max Planck Institute for Biophysical Chemistry, Department of Molecular Biology, Am Fassberg 11, 37077 Göttingen, Germany.

Department of Biochemistry, University of Wisconsin-Madison, Madison, WI 53706, USA.

出版信息

Science. 2017 Apr 14;356(6334):194-197. doi: 10.1126/science.aal3059.

DOI:10.1126/science.aal3059
PMID:28408604
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5528865/
Abstract

DNA transcription is functionally coupled to messenger RNA (mRNA) translation in bacteria, but how this is achieved remains unclear. Here we show that RNA polymerase (RNAP) and the ribosome of can form a defined transcribing and translating "expressome" complex. The cryo-electron microscopic structure of the expressome reveals continuous protection of ~30 nucleotides of mRNA extending from the RNAP active center to the ribosome decoding center. The RNAP-ribosome interface includes the RNAP subunit α carboxyl-terminal domain, which is required for RNAP-ribosome interaction in vitro and for pronounced cell growth defects upon translation inhibition in vivo, consistent with its function in transcription-translation coupling. The expressome structure can only form during transcription elongation and explains how translation can prevent transcriptional pausing, backtracking, and termination.

摘要

在细菌中,DNA转录与信使核糖核酸(mRNA)翻译在功能上相互偶联,但具体实现方式仍不清楚。在此,我们表明RNA聚合酶(RNAP)和核糖体能够形成一个特定的转录和翻译“表达体”复合物。表达体的冷冻电子显微镜结构揭示了从RNAP活性中心延伸至核糖体解码中心的约30个核苷酸的mRNA受到持续保护。RNAP - 核糖体界面包括RNAP亚基α羧基末端结构域,该结构域在体外是RNAP - 核糖体相互作用所必需的,并且在体内翻译抑制时会导致明显的细胞生长缺陷,这与其在转录 - 翻译偶联中的功能一致。表达体结构仅在转录延伸过程中形成,并解释了翻译如何防止转录暂停、回溯和终止。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7aab/5528865/ab5d0e62ff83/nihms876815f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7aab/5528865/2ebe56aef431/nihms876815f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7aab/5528865/27c5fdb2bc2e/nihms876815f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7aab/5528865/0e869e905ea1/nihms876815f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7aab/5528865/ab5d0e62ff83/nihms876815f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7aab/5528865/2ebe56aef431/nihms876815f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7aab/5528865/27c5fdb2bc2e/nihms876815f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7aab/5528865/0e869e905ea1/nihms876815f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7aab/5528865/ab5d0e62ff83/nihms876815f4.jpg

相似文献

1
Architecture of a transcribing-translating expressome.转录-翻译表达体的结构
Science. 2017 Apr 14;356(6334):194-197. doi: 10.1126/science.aal3059.
2
Structural basis of transcription-translation coupling and collision in bacteria.细菌中转录-翻译偶联和碰撞的结构基础。
Science. 2020 Sep 11;369(6509):1355-1359. doi: 10.1126/science.abb5036. Epub 2020 Aug 20.
3
Structural basis of transcription-translation coupling.转录翻译偶联的结构基础。
Science. 2020 Sep 11;369(6509):1359-1365. doi: 10.1126/science.abb5317. Epub 2020 Aug 20.
4
In-cell architecture of an actively transcribing-translating expressome.正在进行转录-翻译的表达体的细胞内结构。
Science. 2020 Jul 31;369(6503):554-557. doi: 10.1126/science.abb3758.
5
Methodology for the analysis of transcription and translation in transcription-coupled-to-translation systems in vitro.体外转录偶联翻译系统中转录和翻译分析的方法学。
Methods. 2015 Sep 15;86:51-9. doi: 10.1016/j.ymeth.2015.05.029. Epub 2015 Jun 14.
6
Cooperation between translating ribosomes and RNA polymerase in transcription elongation.翻译核糖体与 RNA 聚合酶在转录延伸中的合作。
Science. 2010 Apr 23;328(5977):504-8. doi: 10.1126/science.1184939.
7
Transcription-translation coupling: direct interactions of RNA polymerase with ribosomes and ribosomal subunits.转录-翻译偶联:RNA聚合酶与核糖体及核糖体亚基的直接相互作用。
Nucleic Acids Res. 2017 Nov 2;45(19):11043-11055. doi: 10.1093/nar/gkx719.
8
DksA guards elongating RNA polymerase against ribosome-stalling-induced arrest.DksA 保护延伸中的 RNA 聚合酶免受核糖体停滞引起的阻滞。
Mol Cell. 2014 Mar 6;53(5):766-78. doi: 10.1016/j.molcel.2014.02.005.
9
Structure of RNA polymerase bound to ribosomal 30S subunit.RNA 聚合酶与核糖体 30S 亚基结合的结构。
Elife. 2017 Oct 13;6:e28560. doi: 10.7554/eLife.28560.
10
A translational riboswitch coordinates nascent transcription-translation coupling.一种翻译调控的核糖体开关协调新生转录-翻译耦联。
Proc Natl Acad Sci U S A. 2021 Apr 20;118(16). doi: 10.1073/pnas.2023426118.

引用本文的文献

1
Early posttranscriptional response to tetracycline exposure in a gram-negative soil bacterium reveals unexpected attenuation mechanism of a DUF1127 gene.革兰氏阴性土壤细菌对四环素暴露的早期转录后反应揭示了一个DUF1127基因意想不到的衰减机制。
RNA Biol. 2025 Jun 18. doi: 10.1080/15476286.2025.2521887.
2
Defining the networks that connect RNase III and RNase J-mediated regulation of primary and specialized metabolism in .确定连接核糖核酸酶III和核糖核酸酶J介导的原代和特殊代谢调控的网络。 (注:原文句末的“in.”似乎不完整,可能影响对整体意思的准确理解)
J Bacteriol. 2025 May 22;207(5):e0002425. doi: 10.1128/jb.00024-25. Epub 2025 Apr 14.
3
Transcription Kinetics in the Coronavirus Life Cycle.

本文引用的文献

1
Dynamic Behavior of Trigger Factor on the Ribosome.触发因子在核糖体上的动态行为
J Mol Biol. 2016 Sep 11;428(18):3588-602. doi: 10.1016/j.jmb.2016.06.007. Epub 2016 Jun 16.
2
Structures of E. coli σS-transcription initiation complexes provide new insights into polymerase mechanism.大肠杆菌σS转录起始复合物的结构为聚合酶机制提供了新见解。
Proc Natl Acad Sci U S A. 2016 Apr 12;113(15):4051-6. doi: 10.1073/pnas.1520555113. Epub 2016 Mar 28.
3
TRANSCRIPTION. Structures of the RNA polymerase-σ54 reveal new and conserved regulatory strategies.
冠状病毒生命周期中的转录动力学
Wiley Interdiscip Rev RNA. 2025 Jan-Feb;16(1):e70000. doi: 10.1002/wrna.70000.
4
Tracking transcription-translation coupling in real time.实时追踪转录-翻译偶联
Nature. 2025 Jan;637(8045):487-495. doi: 10.1038/s41586-024-08308-w. Epub 2024 Dec 4.
5
Bacterial Rps3 counters oxidative and UV stress by recognizing and processing AP-sites on mRNA via a novel mechanism.细菌的核糖体蛋白S3通过一种新机制识别并处理mRNA上的脱嘌呤嘧啶位点,从而应对氧化应激和紫外线应激。
Nucleic Acids Res. 2024 Dec 11;52(22):13996-14012. doi: 10.1093/nar/gkae1130.
6
Antisense transcription is associated with expression of metal resistance determinants in Cupriavidus metallidurans CH34.反义转录与金属抗性决定因子在嗜金属贪铜菌CH34中的表达相关。
Metallomics. 2024 Dec 2;16(12). doi: 10.1093/mtomcs/mfae057.
7
NusG-Spt5 Transcription Factors: Universal, Dynamic Modulators of Gene Expression.NusG-Spt5转录因子:基因表达的通用动态调节因子
J Mol Biol. 2025 Jan 1;437(1):168814. doi: 10.1016/j.jmb.2024.168814. Epub 2024 Oct 5.
8
Multiplex Expression Cassette Assembly: A flexible and versatile method for building complex genetic circuits in conventional vectors.多重表达盒组装:在常规载体中构建复杂遗传回路的一种灵活通用的方法。
Plant Biotechnol J. 2024 Dec;22(12):3361-3379. doi: 10.1111/pbi.14454. Epub 2024 Aug 23.
9
Structural basis of RfaH-mediated transcription-translation coupling.RfaH介导的转录-翻译偶联的结构基础。
Nat Struct Mol Biol. 2024 Dec;31(12):1932-1941. doi: 10.1038/s41594-024-01372-w. Epub 2024 Aug 8.
10
Bacterial chromatin proteins, transcription, and DNA topology: Inseparable partners in the control of gene expression.细菌染色质蛋白、转录和 DNA 拓扑结构:基因表达调控中不可分割的伙伴。
Mol Microbiol. 2024 Jul;122(1):81-112. doi: 10.1111/mmi.15283. Epub 2024 Jun 7.
转录。RNA聚合酶-σ54的结构揭示了新的保守调控策略。
Science. 2015 Aug 21;349(6250):882-5. doi: 10.1126/science.aab1478.
4
RNA polymerase-induced remodelling of NusA produces a pause enhancement complex.RNA聚合酶诱导的NusA重塑产生一个暂停增强复合物。
Nucleic Acids Res. 2015 Mar 11;43(5):2829-40. doi: 10.1093/nar/gkv108. Epub 2015 Feb 17.
5
DksA guards elongating RNA polymerase against ribosome-stalling-induced arrest.DksA 保护延伸中的 RNA 聚合酶免受核糖体停滞引起的阻滞。
Mol Cell. 2014 Mar 6;53(5):766-78. doi: 10.1016/j.molcel.2014.02.005.
6
A new system for naming ribosomal proteins.核糖体蛋白的新命名系统。
Curr Opin Struct Biol. 2014 Feb;24:165-9. doi: 10.1016/j.sbi.2014.01.002. Epub 2014 Feb 10.
7
X-ray crystal structure of Escherichia coli RNA polymerase σ70 holoenzyme.大肠杆菌 RNA 聚合酶 σ70 全酶的 X 射线晶体结构
J Biol Chem. 2013 Mar 29;288(13):9126-34. doi: 10.1074/jbc.M112.430900. Epub 2013 Feb 6.
8
An α helix to β barrel domain switch transforms the transcription factor RfaH into a translation factor.α 螺旋到 β 桶结构域的转换将转录因子 RfaH 转变为翻译因子。
Cell. 2012 Jul 20;150(2):291-303. doi: 10.1016/j.cell.2012.05.042.
9
The complex of tmRNA-SmpB and EF-G on translocating ribosomes.tmRNA-SmpB 和 EF-G 在翻译延伸核糖体上的复合物。
Nature. 2012 May 6;485(7399):526-9. doi: 10.1038/nature11006.
10
In vitro experimental system for analysis of transcription-translation coupling.体外实验系统分析转录-翻译偶联。
Nucleic Acids Res. 2012 Mar;40(6):e45. doi: 10.1093/nar/gkr1262. Epub 2011 Dec 30.