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本文引用的文献

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Riboswitch diversity and distribution.核糖开关的多样性与分布
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Bioinformatic analysis of riboswitch structures uncovers variant classes with altered ligand specificity.核糖开关结构的生物信息学分析揭示了具有改变的配体特异性的变体类别。
Proc Natl Acad Sci U S A. 2017 Mar 14;114(11):E2077-E2085. doi: 10.1073/pnas.1619581114. Epub 2017 Mar 6.
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The Biology of Free Guanidine As Revealed by Riboswitches.核糖开关揭示的游离胍生物学
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Comparative genomics analyses revealed two virulent strains isolated from ready-to-eat food.比较基因组学分析揭示了从即食食品中分离出的两种致病菌株。
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Metal Fluorides as Analogues for Studies on Phosphoryl Transfer Enzymes.金属氟化物作为磷酸转移酶研究的类似物。
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Riboswitch-Mediated Gene Regulation: Novel RNA Architectures Dictate Gene Expression Responses.核糖开关介导的基因调控:新型 RNA 结构决定基因表达响应。
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Atomic resolution mechanistic studies of ribocil: A highly selective unnatural ligand mimic of the E. coli FMN riboswitch.核黄素类似物核糖嘧啶的原子分辨率机制研究:一种对大肠杆菌FMN核糖开关具有高度选择性的非天然配体模拟物。
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FLUORIDE: A REVIEW OF USE AND EFFECTS ON HEALTH.氟化物:使用情况及其对健康影响的综述
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The yjdF riboswitch candidate regulates gene expression by binding diverse azaaromatic compounds.yjdF核糖开关候选物通过结合多种氮杂芳香族化合物来调节基因表达。
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The Metals in the Biological Periodic System of the Elements: Concepts and Conjectures.元素生物周期系中的金属:概念与推测
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金属核糖开关:基于RNA的无机离子传感器,可调控基因。

Metalloriboswitches: RNA-based inorganic ion sensors that regulate genes.

作者信息

Wedekind Joseph E, Dutta Debapratim, Belashov Ivan A, Jenkins Jermaine L

机构信息

From the Department of Biochemistry & Biophysics and Center for RNA Biology, University of Rochester School of Medicine and Dentistry, Rochester, New York 14642

From the Department of Biochemistry & Biophysics and Center for RNA Biology, University of Rochester School of Medicine and Dentistry, Rochester, New York 14642.

出版信息

J Biol Chem. 2017 Jun 9;292(23):9441-9450. doi: 10.1074/jbc.R117.787713. Epub 2017 Apr 28.

DOI:10.1074/jbc.R117.787713
PMID:28455443
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5465474/
Abstract

Divalent ions fulfill essential cellular roles and are required for virulence by certain bacteria. Free intracellular Mg can approach 5 mm, but at this level Mn, Ni, or Co can be growth-inhibitory, and magnesium fluoride is toxic. To maintain ion homeostasis, many bacteria have evolved ion sensors embedded in the 5'-leader sequences of mRNAs encoding ion uptake or efflux channels. Here, we review current insights into these "metalloriboswitches," emphasizing ion-specific binding by structured RNA aptamers and associated conformational changes in downstream signal sequences. This riboswitch-effector interplay produces a layer of gene regulatory feedback that has elicited interest as an antibacterial target.

摘要

二价离子在细胞中发挥着重要作用,某些细菌的毒力也需要它们。细胞内游离的镁离子浓度可接近5毫摩尔,但在此浓度下,锰、镍或钴可能会抑制生长,而氟化镁则有毒性。为维持离子稳态,许多细菌进化出了嵌入编码离子摄取或外排通道的mRNA 5'前导序列中的离子传感器。在这里,我们综述了目前对这些“金属核糖开关”的认识,重点介绍了结构化RNA适体与离子的特异性结合以及下游信号序列相关的构象变化。这种核糖开关与效应物的相互作用产生了一层基因调控反馈,作为抗菌靶点引起了人们的兴趣。