Keller Markus A, Kampjut Domen, Harrison Stuart A, Ralser Markus
Department of Biochemistry and Cambridge Systems Biology Centre, University of Cambridge, 80 Tennis Court Rd, Cambridge CB2 1GA, UK.
Division of Biological Chemistry, Biocenter, Medical University of Innsbruck, Innrain 80-82, 6020 Innsbruck, Austria.
Nat Ecol Evol. 2017 Mar 13;1(4):83. doi: 10.1038/s41559-017-0083.
The evolutionary origins of the tricarboxylic acid cycle (TCA), or Krebs cycle, are so far unclear. Despite a few years ago, the existence of a simple non-enzymatic Krebs-cycle catalyst has been dismissed 'as an appeal to magic', citrate and other intermediates have meanwhile been discovered on a carbonaceous meteorite and do interconvert non-enzymatically. To identify the non-enzymatic Krebs cycle catalyst, we used combinatorial, quantitative high-throughput metabolomics to systematically screen iron and sulfate reaction milieus that orient on Archean sediment constituents. TCA cycle intermediates are found stable in water and in the presence of most iron and sulfate species, including simple iron-sulfate minerals. However, we report that TCA intermediates undergo 24 interconversion reactions in the presence of sulfate radicals that form from peroxydisulfate. The non-enzymatic reactions critically cover a topology as present in the Krebs cycle, the glyoxylate shunt and the succinic semialdehyde pathways. Assembled in a chemical network, the reactions achieve more than ninety percent carbon recovery. Our results show that a non-enzymatic precursor for the Krebs cycle is biologically sensible, efficient, and forms spontaneously in the presence of sulfate radicals.
三羧酸循环(TCA),即克雷布斯循环的进化起源至今仍不清楚。尽管几年前,一种简单的非酶促克雷布斯循环催化剂的存在被斥为“诉诸魔法”,但与此同时,在一颗碳质陨石上发现了柠檬酸盐和其他中间体,它们确实能进行非酶促的相互转化。为了鉴定非酶促克雷布斯循环催化剂,我们使用组合式定量高通量代谢组学系统地筛选了以太古宙沉积物成分为导向的铁和硫酸盐反应环境。三羧酸循环中间体在水中以及在大多数铁和硫酸盐物种(包括简单的硫酸铁矿物)存在的情况下是稳定的。然而,我们报告称,在过二硫酸盐形成的硫酸根自由基存在的情况下,三羧酸循环中间体会发生24种相互转化反应。这些非酶促反应严格涵盖了克雷布斯循环、乙醛酸分流和琥珀酸半醛途径中存在的拓扑结构。这些反应组装成一个化学网络后,碳回收率超过90%。我们的结果表明,克雷布斯循环的非酶促前体在生物学上是合理的、高效的,并且在硫酸根自由基存在的情况下会自发形成。