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嗜食吸管菌新种,一种从沙质土壤中分离出的丝状捕食性细菌,以及巨大吸管菌新种,名称订正

Herpetosiphon gulosus sp. nov., a filamentous predatory bacterium isolated from sandy soil and Herpetosiphon giganteus sp. nov., nom. rev.

作者信息

Pan Xinli, Kage Hirokazu, Martin Karin, Nett Markus

机构信息

Department of Biochemical and Chemical Engineering, Technical University Dortmund, Emil-Figge-Str. 66, 44227 Dortmund, Germany.

Leibniz Institute for Natural Product Research and Infection Biology e. V., Hans-Knöll- Institute, Beutenbergstr. 11a, 07745 Jena, Germany.

出版信息

Int J Syst Evol Microbiol. 2017 Jul;67(7):2476-2481. doi: 10.1099/ijsem.0.002141. Epub 2017 Jul 26.

Abstract

Three filamentous gliding bacteria from the German Collection of Microorganisms and Cell Cultures, Hp g11, Hp g471 and Hp g472, were subjected to a phylogenetic analysis. These organisms had previously been classified as members of the genus Herpetosiphon based on their growth physiology and morphology. However, a taxonomic assignment at the species level had not been carried out. Analysis of 16S rRNA sequences now confirmed the close relationship of strain Hp g472 to Herpetosiphon aurantiacus DSM 785T (98.6 % nucleotide identity) and Herpetosiphon geysericola DSM 7119T (97.7 %). The results of DNA-DNA hybridization experiments further implied that strain Hp g472 should be classified as a distinct species. The DNA G+C content of strain Hp g472 was 49.9 mol%. The major quinone was MK-10 and the predominant cellular fatty acids were C18 : 1, C16 : 1 and C16 : 0. Based on phenotypic, chemotaxonomic and phylogenetic data it was concluded that strain Hp g472 represents a novel species of the genus Herpetosiphon, for which the name Herpetosiphon gulosus sp. nov. is proposed. The type strain is Hp g472T (=DSM 52871T=NBRC 112829T). In contrast to Hp g472T, the strains Hp g11 and Hp g471 exhibited closest 16S rRNA gene sequence similarity (>99 %) with 'Herpetosiphon giganteus' Hp a2. The distinctive genotypic and phenotypic properties of the latter supported the revival of the name as Herpetosiphon giganteus (ex Reichenbach & Golecki, 1975) sp. nov., nom. rev. We propose the previously deposited reference strain DSM 589T=NBRC 112828T as the type strain.

摘要

对德国微生物和细胞培养物保藏中心的三株丝状滑行细菌Hp g11、Hp g471和Hp g472进行了系统发育分析。这些微生物此前根据其生长生理学和形态学被归类为赫氏吸管菌属的成员。然而,尚未进行种水平的分类鉴定。16S rRNA序列分析现在证实了菌株Hp g472与橙色赫氏吸管菌DSM 785T(核苷酸同一性为98.6%)和间歇泉赫氏吸管菌DSM 7119T(97.7%)密切相关。DNA-DNA杂交实验结果进一步表明,菌株Hp g472应被归类为一个独特的物种。菌株Hp g472的DNA G+C含量为49.9 mol%。主要醌为MK-10,主要细胞脂肪酸为C18 : 1、C16 : 1和C16 : 0。基于表型、化学分类学和系统发育数据,得出结论:菌株Hp g472代表赫氏吸管菌菌的一个新物种,为此提出名称赫氏贪食吸管菌(Herpetosiphon gulosus)新种。模式菌株为Hp g472T(=DSM 52871T=NBRC 112829T)。与Hp g472T相反,菌株Hp g11和Hp g471与“巨大赫氏吸管菌”Hp a2表现出最接近的16S rRNA基因序列相似性(>99%)。后者独特的基因型和表型特性支持将该名称恢复为巨大赫氏吸管菌(Herpetosiphon giganteus)(源自Reichenbach & Golecki,1975)新种,名称修正。我们提议将先前保藏的参考菌株DSM 589T=NBRC 112828T作为模式菌株。

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