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水生动物通过接合作用促进水中抗生素抗性基因的传播:斑马鱼肠道不同区域的作用及其对鱼类肠道微生物群的影响。

Aquatic animals promote antibiotic resistance gene dissemination in water via conjugation: Role of different regions within the zebra fish intestinal tract, and impact on fish intestinal microbiota.

作者信息

Fu Jialun, Yang Dong, Jin Min, Liu Weili, Zhao Xin, Li Chenyu, Zhao Tianyu, Wang Jingfeng, Gao Zhixian, Shen Zhiqiang, Qiu Zhigang, Li Jun-Wen

机构信息

Institute of Health and Environmental Medicine, Key Laboratory of Risk Assessment and Control for Environment and Food Safety, Tianjin, China.

Institute of Medical Equipment, Academy of Military Medical Sciences, Tianjin, China.

出版信息

Mol Ecol. 2017 Oct;26(19):5318-5333. doi: 10.1111/mec.14255. Epub 2017 Aug 14.

Abstract

The aqueous environment is one of many reservoirs of antibiotic resistance genes (ARGs). Fish, as important aquatic animals which possess ideal intestinal niches for bacteria to grow and multiply, may ingest antibiotic resistance bacteria from aqueous environment. The fish gut would be a suitable environment for conjugal gene transfer including those encoding antibiotic resistance. However, little is known in relation to the impact of ingested ARGs or antibiotic resistance bacteria (ARB) on gut microbiota. Here, we applied the cultivation method, qPCR, nuclear molecular genetic marker and 16S rDNA amplicon sequencing technologies to develop a plasmid-mediated ARG transfer model of zebrafish. Furthermore, we aimed to investigate the dissemination of ARGs in microbial communities of zebrafish guts after donors carrying self-transferring plasmids that encode ARGs were introduced in aquaria. On average, 15% of faecal bacteria obtained ARGs through RP4-mediated conjugal transfer. The hindgut was the most important intestinal region supporting ARG dissemination, with concentrations of donor and transconjugant cells almost 25 times higher than those of other intestinal segments. Furthermore, in the hindgut where conjugal transfer occurred most actively, there was remarkable upregulation of the mRNA expression of the RP4 plasmid regulatory genes, trbBp and trfAp. Exogenous bacteria seem to alter bacterial communities by increasing Escherichia and Bacteroides species, while decreasing Aeromonas compared with control groups. We identified the composition of transconjugants and abundance of both cultivable and uncultivable bacteria (the latter accounted for 90.4%-97.2% of total transconjugants). Our study suggests that aquatic animal guts contribute to the spread of ARGs in water environments.

摘要

水环境是抗生素抗性基因(ARGs)的众多储存库之一。鱼类作为重要的水生动物,拥有适合细菌生长和繁殖的理想肠道生态位,可能会从水环境中摄取抗生素抗性细菌。鱼肠道将是一个适合进行接合基因转移的环境,包括那些编码抗生素抗性的基因。然而,关于摄入的ARGs或抗生素抗性细菌(ARB)对肠道微生物群的影响,我们知之甚少。在这里,我们应用培养方法、定量聚合酶链反应(qPCR)、核分子遗传标记和16S核糖体DNA(rDNA)扩增子测序技术,建立了斑马鱼的质粒介导的ARG转移模型。此外,我们旨在研究在水族箱中引入携带编码ARGs的自我转移质粒的供体后,ARGs在斑马鱼肠道微生物群落中的传播情况。平均而言,15%的粪便细菌通过RP4介导的接合转移获得了ARGs。后肠是支持ARG传播的最重要肠道区域,供体细胞和接合子细胞的浓度几乎比其他肠道段高25倍。此外,在接合转移最活跃的后肠中,RP4质粒调控基因trbBp和trfAp的mRNA表达显著上调。与对照组相比,外源细菌似乎通过增加大肠杆菌和拟杆菌属物种,同时减少气单胞菌属来改变细菌群落。我们确定了接合子的组成以及可培养和不可培养细菌的丰度(后者占总接合子的90.4%-97.2%)。我们的研究表明,水生动物肠道有助于ARGs在水环境中的传播。

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