Department of Chemistry, University of Warwick , Gibbet Hill Road, Coventry CV4 7AL, U.K.
Center for Integrated Protein Science, Department of Chemistry, Munich Technische Universität München , Lichtenbergstrasse 4, 85748 Garching, Germany.
J Am Chem Soc. 2017 Sep 6;139(35):12165-12174. doi: 10.1021/jacs.7b03875. Epub 2017 Aug 25.
Solid-state NMR is becoming a viable alternative for obtaining information about structures and dynamics of large biomolecular complexes, including ones that are not accessible to other high-resolution biophysical techniques. In this context, methods for probing protein-protein interfaces at atomic resolution are highly desirable. Solvent paramagnetic relaxation enhancements (sPREs) proved to be a powerful method for probing protein-protein interfaces in large complexes in solution but have not been employed toward this goal in the solid state. We demonstrate that H and N relaxation-based sPREs provide a powerful tool for characterizing intermolecular interactions in large assemblies in the solid state. We present approaches for measuring sPREs in practically the entire range of magic angle spinning frequencies used for biomolecular studies and discuss their benefits and limitations. We validate the approach on crystalline GB1, with our experimental results in good agreement with theoretical predictions. Finally, we use sPREs to characterize protein-protein interfaces in the GB1 complex with immunoglobulin G (IgG). Our results suggest the potential existence of an additional binding site and provide new insights into GB1:IgG complex structure that amend and revise the current model available from studies with IgG fragments. We demonstrate sPREs as a practical, widely applicable, robust, and very sensitive technique for determining intermolecular interaction interfaces in large biomolecular complexes in the solid state.
固态 NMR 正成为获取关于大型生物分子复合物结构和动态信息的可行替代方法,包括那些无法通过其他高分辨率生物物理技术获得的信息。在这种情况下,探测蛋白质-蛋白质界面的原子分辨率的方法是非常需要的。溶剂顺磁松弛增强(sPREs)已被证明是探测溶液中大型复合物中蛋白质-蛋白质界面的一种强大方法,但在固态中尚未应用于该目的。我们证明了基于 H 和 N 弛豫的 sPREs 是一种在固态中表征大分子组装体中分子间相互作用的强大工具。我们提出了在用于生物分子研究的几乎整个魔角旋转频率范围内测量 sPREs 的方法,并讨论了它们的优缺点。我们在结晶 GB1 上验证了该方法,实验结果与理论预测吻合良好。最后,我们使用 sPREs 来表征 GB1 与免疫球蛋白 G(IgG)复合物中的蛋白质-蛋白质界面。我们的结果表明可能存在额外的结合位点,并为 GB1:IgG 复合物结构提供了新的见解,这些见解修正和修改了当前基于 IgG 片段研究的可用模型。我们证明 sPREs 是一种实用、广泛适用、稳健且非常灵敏的技术,可用于确定固态中大型生物分子复合物中的分子间相互作用界面。