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从内罗毕家畜粪便和动物产品中分离出的[具体物质未给出]的分子特征及抗生素耐药性概况

Molecular characterization and antibiotic resistance profiles of isolated from fecal matter of domestic animals and animal products in Nairobi.

作者信息

Nyabundi Diana, Onkoba Nyamongo, Kimathi Rinter, Nyachieo Atunga, Juma Gerald, Kinyanjui Peter, Kamau Joseph

机构信息

Department of Biochemistry, School of Medicine, University of Nairobi, P.O. Box 30197-00100, Nairobi, Kenya.

Institute of Primate Research, P.O. Box 24481-00502, Karen, Nairobi, Kenya.

出版信息

Trop Dis Travel Med Vaccines. 2017 Jan 13;3:2. doi: 10.1186/s40794-016-0045-6. eCollection 2017.

Abstract

BACKGROUND

has significant public health implications causing food borne and zoonotic diseases in humans. Treatment of infections due to is becoming difficult due to emergence of drug resistant strains. There is therefore need to characterize the circulating non-typhoidal (NTS) serovars in domestic animals and animal products in Kenya as well as determine their antibiotic resistance profiles.

METHODS

A total of 740 fecal samples were collected from cows ( = 150), pigs ( = 182), chicken ( = 191) and chicken eggs ( = 217) from various markets and abattoirs in Nairobi. The prevalence of NTS serovars using culture techniques and biochemical tests, antimicrobial sensitivity testing using disc diffusion method of the commonly prescribed antibiotics and phylogenetic relationships using 16S rRNA were determined.

RESULTS

The results showed that the overall prevalence of was 3.8, 3.6, 5.9 and 2.6% for pigs, chicken, eggs and cows respectively. Two serovars were isolated Typhimurium (85%) and Enteritidis (15%) and these two serovars formed distinct clades on the phylogenetic tree. Forty percent of the isolates were resistant to one or more antibiotics.

CONCLUSION

The isolation of Typhimurium and Enteritidis that are resistant to commonly used antibiotics from seemingly healthy animals and animal products poses a significant public health threat. This points to the need for regular surveillance to be carried out and the chain of transmission should be viewed to ascertain sources of contamination.

摘要

背景

具有重大的公共卫生影响,可导致人类食源性疾病和人畜共患病。由于耐药菌株的出现,治疗由其引起的感染正变得困难。因此,有必要对肯尼亚家畜和动物产品中循环的非伤寒沙门氏菌(NTS)血清型进行特征描述,并确定其抗生素耐药谱。

方法

从内罗毕的各个市场和屠宰场收集了总共740份粪便样本,其中包括奶牛(n = 150)、猪(n = 182)、鸡(n = 191)和鸡蛋(n = 217)。使用培养技术和生化试验确定NTS血清型的流行率,使用纸片扩散法对常用抗生素进行抗菌敏感性测试,并使用16S rRNA确定系统发育关系。

结果

结果显示,猪、鸡、鸡蛋和奶牛中该菌的总体流行率分别为3.8%、3.6%、5.9%和2.6%。分离出两种血清型——鼠伤寒沙门氏菌(85%)和肠炎沙门氏菌(15%),这两种血清型在系统发育树上形成了不同的分支。40%的分离株对一种或多种抗生素耐药。

结论

从看似健康的动物和动物产品中分离出对常用抗生素耐药的鼠伤寒沙门氏菌和肠炎沙门氏菌,对公共卫生构成了重大威胁。这表明需要定期进行监测,并应查看传播链以确定污染源。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cd40/5530968/2739b363bbfc/40794_2016_45_Fig1_HTML.jpg

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