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柑橘极地杆菌新种,从海参养殖池塘的沉积物中分离得到。

Polaribacter tangerinus sp. nov., isolated from sediment in a sea cucumber culture pond.

作者信息

Han Ji-Ru, Wang Kan, Zhang Jing, Chen Guan-Jun, Du Zong-Jun

机构信息

State key Laboratory of Microbial Technology, Shandong University, Jinan 250100, PR China.

College of Marine Science, Shandong University, Weihai 264209, PR China.

出版信息

Int J Syst Evol Microbiol. 2017 Nov;67(11):4736-4741. doi: 10.1099/ijsem.0.002369. Epub 2017 Oct 6.

Abstract

A Gram-stain-negative, aerobic, non-motile, coccoid, ovoid or rod-shaped, and orange-pigmented bacterial strain, designated WS2-14, was isolated from sediment collected from a sea cucumber culture pond located in Rongcheng, Shandong province, PR China (122° 14' E, 36° 54' N). Strain WS2-14 grew optimally at 28 °C and pH 7.0-7.5, and was able to tolerate salt concentrations of 0.5-6.0 % (w/v) NaCl. Strain WS2-14 was characterized chemotaxonomically as possessing menaquinone-6 (MK-6) as the major respiratory quinone, as well as iso-C13 : 0, iso-C15 : 0 3-OH and iso-C15 : 0 as the predominant fatty acids. The DNA G+C content of strain WS2-14 was 31.2 mol%. The major polar lipids were phosphatidylethanolamine, one unidentified phospholipid, one unidentified aminolipid and three unidentified lipids. Phylogenetic analyses based on 16S rRNA gene sequences revealed that strain WS2-14 was phylogenetically related to members of the genus Polaribacter and was closely related to Polaribacter haliotis, Polaribacter atrinae and Polaribacter sejongensis with 97.7, 97.4 and 97.0 % sequence similarities, respectively. On the basis of its phenotypic and chemotaxonomic properties, as well as phylogenetic analyses, strain WS2-14 was considered to represent a novel species of the genus Polaribacter, for which the name Polaribactertangerinus sp. nov. is proposed. The type strain is WS2-14 (=KCTC 52275=MCCC 1H00163).

摘要

从中国山东省荣成市(东经122°14′,北纬36°54′)海参养殖池塘采集的沉积物中分离出一株革兰氏阴性、需氧、不运动、球状、卵形或杆状且产橙色色素的细菌菌株,命名为WS2-14。菌株WS2-14在28 °C和pH 7.0 - 7.5条件下生长最佳,能够耐受0.5 - 6.0 %(w/v)NaCl的盐浓度。菌株WS2-14的化学分类特征为:主要呼吸醌为甲基萘醌-6(MK-6),主要脂肪酸为异-C13 : 0、异-C15 : 0 3-OH和异-C15 : 0。菌株WS2-14的DNA G+C含量为31.2 mol%。主要极性脂为磷脂酰乙醇胺、一种未鉴定的磷脂、一种未鉴定的氨基脂和三种未鉴定的脂类。基于16S rRNA基因序列的系统发育分析表明,菌株WS2-14在系统发育上与极地杆菌属成员相关,与皱纹盘鲍极地杆菌、紫贻贝极地杆菌和世宗极地杆菌亲缘关系密切,序列相似性分别为97.7%、97.4%和97.0 %。基于其表型、化学分类学特性以及系统发育分析,菌株WS2-14被认为代表极地杆菌属的一个新物种,为此提出新名称极地橘黄杆菌(Polaribactertangerinus sp. nov.)。模式菌株为WS2-14(=KCTC 52275=MCCC 1H00163)。

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