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克氏螺菌新种(Spirosoma knui sp. nov.),一种从汉江分离出的抗辐射细菌。

Spirosoma knui sp. nov., a radiation-resistant bacterium isolated from the Han River.

作者信息

Lee Jae-Jin, Lee Yeon-Hee, Park Su-Jin, Lee Seung-Yeol, Kim Byung-Oh, Ten Leonid N, Kim Myung Kyum, Jung Hee-Young

机构信息

School of Applied Biosciences, Kyungpook National University, Daegu 41566, Republic of Korea.

School of Food Science and Biotechnology, Kyungpook National University, Daegu 41566, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2017 May;67(5):1359-1365. doi: 10.1099/ijsem.0.001817. Epub 2017 May 30.

Abstract

A Gram-stain-negative, non-motile, non-spore-forming, rod-shaped, aerobic bacterium, designated 15J8-12T, was isolated from a water sample after exposure to 3 kGy of gamma radiation. The strain showed resistance to gamma radiation with a dose required to reduce the bacterial population 10 fold (D10) value of 4.7 kGy. The results of comparative 16S rRNA gene sequence analysis indicated that strain 15J8-12T represented a member of the family Cytophagaceae, phylum Bacteroidetes, and was most closely related to 'Spirosomafluminis' 15J17 (97.92 %) and Spirosoma arcticum R2-35T (92.22 %). The G+C content of the genomic DNA of 15J8-12T was 51.3 mol%. The detection of menaquinone MK-7 as the predominant respiratory quinone, a fatty acid profile with summed feature 3 (C16 : 1ω7c/C16 : 1ω6c; 40.5 %), C16 : 1ω5c (35.3 %), C15 : 0 iso (6.9 %) and C16 : 0 (6.8 %) as the major components and phosphatidylethanolamine as the major polar lipid also supported the affiliation of 15J8-12T with the genus Spirosoma. The DNA-DNA relatedness between 15J8-12T and 'Spirosoma fluminis' 15J17 was 27.8 %. On the basis of its phenotypic and genotypic properties, together with its phylogenetic distinctiveness, 15J8-12T should be considered to be a representative of a novel species of the genus Spirosoma, for which the name Spirosoma knui sp. nov. is proposed. The type strain is 15J8-12T (=KCTC 52510T=JCM 31407T).

摘要

从经3千戈瑞伽马辐射处理后的水样中分离出一株革兰氏染色阴性、无运动性、不形成芽孢、杆状的需氧细菌,命名为15J8 - 12T。该菌株对伽马辐射具有抗性,使细菌数量减少10倍所需的剂量(D10)值为4.7千戈瑞。16S rRNA基因序列比较分析结果表明,菌株15J8 - 12T属于拟杆菌门噬细胞菌科,与“河流螺旋体菌”15J17(相似度97.92%)和北极螺旋体菌R2 - 35T(相似度92.22%)关系最为密切。15J8 - 12T基因组DNA的G + C含量为51.3摩尔%。检测到主要呼吸醌为甲基萘醌MK - 7,以特征性总和3(C16 : 1ω7c/C16 : 1ω6c;40.5%)、C16 : 1ω5c(35.3%)、C15 : 0异戊酸(6.9%)和C16 : 0(6.8%)为主要成分的脂肪酸谱以及以磷脂酰乙醇胺为主要极性脂质,这些也支持15J8 - 12T归属于螺旋体菌属。15J8 - 12T与“河流螺旋体菌”15J17之间的DNA - DNA相关性为27.8%。基于其表型和基因型特性以及系统发育独特性,15J8 - 12T应被视为螺旋体菌属一个新物种的代表,为此提出新物种名称螺旋体菌克努伊氏菌(Spirosoma knui sp. nov.)。模式菌株为15J8 - 12T(=KCTC 52510T=JCM 31407T)。

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