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热带花球菌属新属、新种以及槟城花球菌新种,从榴莲树和芙蓉的鲜花中分离得到。

Floricoccus tropicus gen. nov., sp. nov. and Floricoccus penangensis sp. nov. isolated from fresh flowers of durian tree and hibiscus.

作者信息

Chuah Li-Oon, Yap Kien-Pong, Shamila-Syuhada Ahamed Kamal, Thong Kwai Lin, Ahmad Rosma, Liong Min Tze, Rusul Gulam

机构信息

Food Technology Division, School of Industrial Technology, Universiti Sains Malaysia, Minden, Penang, Malaysia.

Institute of Biological Sciences, Faculty of Science Building, University of Malaya, Kuala Lumpur, Malaysia.

出版信息

Int J Syst Evol Microbiol. 2017 Dec;67(12):4979-4985. doi: 10.1099/ijsem.0.002386. Epub 2017 Oct 16.

Abstract

Three strains of Gram-staining-positive, coccus-shaped, lactic acid bacteria, designated as HibF3, HibF2 and HibF5 were isolated from fresh flowers of hibiscus, and a fourth, DF1, was isolated from fresh flowers of durian tree, in Penang, Malaysia. Taxonomic characterisation was performed by polyphasic analysis. Sequence similarities of the 16S rRNA gene and the housekeeping rpoA and pheS genes of these strains with their closely-related lactococcal and streptococcal relatives were 92-94, 78 and 81 %, respectively. The results of phylogenetic analysis indicated that strains DF1, HibF2, HibF5 and HibF3 were clustered together but were clearly separated from species of the genera Streptococcus and Lactococcus, indicating that they represent members of a novel genus of the family Streptococcaceae. Calculation of average nucleotide identity (ANI) values between the genomes of DF1 and HibF3 yielded values of 92.50-92.93 %. ANI values below the cut-off value and distinctive chemotaxonomic characteristics supported the hypothesis that these strains represented two novel species. Major cellular fatty acids in DF1, HibF2 and HibF5 were C18 : 1ω7c and C16 : 0, while C12 : 0 and C14 : 0 were also dominant, in addition to C18 : 1ω7c and C16 : 0, in HibF3. A novel genus is proposed with the name Floricoccus gen. nov. which consists of two species, Floricoccus tropicus sp. nov as the type species, and Floricoccus penangensis sp. nov. The respective type strains are DF1 (=LMG 29833=JCM 31733) and HibF3 (=LMG 29831=DSM 31735).

摘要

从马来西亚槟城的芙蓉鲜花中分离出三株革兰氏染色阳性、球菌状的乳酸菌,分别命名为HibF3、HibF2和HibF5,从榴莲树鲜花中分离出第四株DF1。通过多相分析进行分类学鉴定。这些菌株的16S rRNA基因以及看家基因rpoA和pheS基因与其密切相关的乳球菌属和链球菌属亲缘关系的序列相似性分别为92 - 94%、78%和81%。系统发育分析结果表明,菌株DF1、HibF2、HibF5和HibF3聚集在一起,但明显与链球菌属和乳球菌属的物种分开,表明它们代表链球菌科一个新属的成员。DF1和HibF3基因组之间的平均核苷酸同一性(ANI)值计算结果为92.50 - 92.93%。低于临界值的ANI值和独特的化学分类特征支持了这些菌株代表两个新物种的假设。DF1、HibF2和HibF5中的主要细胞脂肪酸为C18 : 1ω7c和C16 : 0,而除了C18 : 1ω7c和C16 : 0外,C12 : 0和C14 : 0在HibF3中也占主导地位。提出了一个新属,命名为花球菌属(Floricoccus gen. nov.),它由两个物种组成,热带花球菌(Floricoccus tropicus sp. nov)作为模式种,以及槟城花球菌(Floricoccus penangensis sp. nov)。各自的模式菌株分别为DF1(=LMG 29833 =JCM 31733)和HibF3(=LMG 29831 =DSM 31735)。

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