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本文引用的文献

1
Coherent soft X-ray diffraction imaging of coliphage PR772 at the Linac coherent light source.在直线感应加速器相干光源下对噬菌体 PR772 的相干软 X 射线衍射成像。
Sci Data. 2017 Jun 27;4:170079. doi: 10.1038/sdata.2017.79.
2
Reconstruction from limited single-particle diffraction data via simultaneous determination of state, orientation, intensity, and phase.通过同时确定状态、取向、强度和相位从有限的单粒子衍射数据进行重建。
Proc Natl Acad Sci U S A. 2017 Jul 11;114(28):7222-7227. doi: 10.1073/pnas.1708217114. Epub 2017 Jun 26.
3
Angular correlations of photons from solution diffraction at a free-electron laser encode molecular structure.来自自由电子激光溶液衍射的光子角关联编码分子结构。
IUCrJ. 2016 Sep 26;3(Pt 6):420-429. doi: 10.1107/S2052252516013956. eCollection 2016 Nov 1.
4
The linac coherent light source single particle imaging road map.直线感应加速器相干光源单颗粒成像路线图。
Struct Dyn. 2015 Apr 21;2(4):041701. doi: 10.1063/1.4918726. eCollection 2015 Jul.
5
Sorting algorithms for single-particle imaging experiments at X-ray free-electron lasers.用于X射线自由电子激光单粒子成像实验的排序算法。
J Synchrotron Radiat. 2015 Nov;22(6):1345-52. doi: 10.1107/S1600577515017348. Epub 2015 Oct 22.
6
Iterative phasing for fluctuation X-ray scattering.用于波动X射线散射的迭代相位法。
Proc Natl Acad Sci U S A. 2015 Aug 18;112(33):10286-91. doi: 10.1073/pnas.1513738112. Epub 2015 Aug 3.
7
Theoretical study of electronic damage in single-particle imaging experiments at x-ray free-electron lasers for pulse durations from 0.1 to 10 fs.关于X射线自由电子激光单粒子成像实验中脉冲持续时间从0.1飞秒至10飞秒时电子损伤的理论研究。
Phys Rev E Stat Nonlin Soft Matter Phys. 2015 Jun;91(6):062712. doi: 10.1103/PhysRevE.91.062712. Epub 2015 Jun 15.
8
Operational properties of fluctuation X-ray scattering data.涨落 X 射线散射数据的运算性质。
IUCrJ. 2015 Mar 20;2(Pt 3):309-16. doi: 10.1107/S2052252515002535. eCollection 2015 May 1.
9
Deducing fast electron density changes in randomly orientated uncrystallized biomolecules in a pump-probe experiment.在泵浦-探测实验中推断随机取向的非晶态生物分子中的快速电子密度变化。
Philos Trans R Soc Lond B Biol Sci. 2014 Jul 17;369(1647):20130332. doi: 10.1098/rstb.2013.0332.
10
High-resolution structure of viruses from random diffraction snapshots.基于随机衍射快照的病毒高分辨率结构
Philos Trans R Soc Lond B Biol Sci. 2014 Jul 17;369(1647):20130326. doi: 10.1098/rstb.2013.0326.

散射X射线激光脉冲中的相关性揭示了病毒的纳米级结构特征。

Correlations in Scattered X-Ray Laser Pulses Reveal Nanoscale Structural Features of Viruses.

作者信息

Kurta Ruslan P, Donatelli Jeffrey J, Yoon Chun Hong, Berntsen Peter, Bielecki Johan, Daurer Benedikt J, DeMirci Hasan, Fromme Petra, Hantke Max Felix, Maia Filipe R N C, Munke Anna, Nettelblad Carl, Pande Kanupriya, Reddy Hemanth K N, Sellberg Jonas A, Sierra Raymond G, Svenda Martin, van der Schot Gijs, Vartanyants Ivan A, Williams Garth J, Xavier P Lourdu, Aquila Andrew, Zwart Peter H, Mancuso Adrian P

机构信息

European XFEL GmbH, Holzkoppel 4, D-22869 Schenefeld, Germany.

Mathematics Department, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley, California 94720, USA.

出版信息

Phys Rev Lett. 2017 Oct 13;119(15):158102. doi: 10.1103/PhysRevLett.119.158102. Epub 2017 Oct 12.

DOI:10.1103/PhysRevLett.119.158102
PMID:29077445
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5757528/
Abstract

We use extremely bright and ultrashort pulses from an x-ray free-electron laser (XFEL) to measure correlations in x rays scattered from individual bioparticles. This allows us to go beyond the traditional crystallography and single-particle imaging approaches for structure investigations. We employ angular correlations to recover the three-dimensional (3D) structure of nanoscale viruses from x-ray diffraction data measured at the Linac Coherent Light Source. Correlations provide us with a comprehensive structural fingerprint of a 3D virus, which we use both for model-based and ab initio structure recovery. The analyses reveal a clear indication that the structure of the viruses deviates from the expected perfect icosahedral symmetry. Our results anticipate exciting opportunities for XFEL studies of the structure and dynamics of nanoscale objects by means of angular correlations.

摘要

我们使用来自X射线自由电子激光(XFEL)的极亮且超短脉冲,来测量从单个生物粒子散射的X射线中的相关性。这使我们能够超越传统的晶体学和单粒子成像方法进行结构研究。我们利用角相关性,从在直线加速器相干光源处测得的X射线衍射数据中恢复纳米级病毒的三维(3D)结构。相关性为我们提供了3D病毒的全面结构指纹,我们将其用于基于模型和从头开始的结构恢复。分析结果清楚地表明,病毒的结构偏离了预期的完美二十面体对称性。我们的结果预示着通过角相关性对纳米级物体的结构和动力学进行XFEL研究将带来令人兴奋的机遇。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8fd0/5757528/c22f2ee18483/nihms914609f4.jpg
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